Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
RORAP35398 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.94■□□□□ 0.46
RORAP35398 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.94■□□□□ 0.46
RORAP35398 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.94■□□□□ 0.46
RORAP35398 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.94■□□□□ 0.46
RORAP35398 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.94■□□□□ 0.46
RORAP35398 NEK4P2-201ENST00000580004 1012 ntBASIC17.94■□□□□ 0.46
RORAP35398 AC140113.3-201ENST00000605663 199 ntBASIC17.94■□□□□ 0.46
RORAP35398 AC008622.2-201ENST00000617006 1229 ntBASIC17.94■□□□□ 0.46
RORAP35398 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.94■□□□□ 0.46
RORAP35398 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
RORAP35398 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RORAP35398 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.94■□□□□ 0.46
RORAP35398 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.94■□□□□ 0.46
RORAP35398 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.93■□□□□ 0.46
RORAP35398 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RORAP35398 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RORAP35398 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.93■□□□□ 0.46
RORAP35398 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.93■□□□□ 0.46
RORAP35398 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RORAP35398 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.93■□□□□ 0.46
RORAP35398 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RORAP35398 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RORAP35398 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.93■□□□□ 0.46
RORAP35398 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RORAP35398 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.93■□□□□ 0.46
RORAP35398 AP000523.1-201ENST00000398242 1049 ntBASIC17.93■□□□□ 0.46
RORAP35398 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RORAP35398 AC009947.2-201ENST00000444014 672 ntBASIC17.93■□□□□ 0.46
RORAP35398 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.93■□□□□ 0.46
RORAP35398 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
RORAP35398 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RORAP35398 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RORAP35398 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.93■□□□□ 0.46
RORAP35398 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RORAP35398 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RORAP35398 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RORAP35398 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.93■□□□□ 0.46
RORAP35398 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RORAP35398 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RORAP35398 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RORAP35398 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RORAP35398 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RORAP35398 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RORAP35398 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.92■□□□□ 0.46
RORAP35398 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.92■□□□□ 0.46
RORAP35398 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RORAP35398 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RORAP35398 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RORAP35398 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.92■□□□□ 0.46
RORAP35398 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RORAP35398 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RORAP35398 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RORAP35398 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RORAP35398 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RORAP35398 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RORAP35398 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.92■□□□□ 0.46
RORAP35398 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.92■□□□□ 0.46
RORAP35398 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.92■□□□□ 0.46
RORAP35398 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.92■□□□□ 0.46
RORAP35398 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.92■□□□□ 0.46
RORAP35398 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.92■□□□□ 0.46
RORAP35398 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.92■□□□□ 0.46
RORAP35398 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.92■□□□□ 0.46
RORAP35398 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
RORAP35398 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RORAP35398 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.92■□□□□ 0.46
RORAP35398 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RORAP35398 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RORAP35398 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.91■□□□□ 0.46
RORAP35398 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.91■□□□□ 0.46
RORAP35398 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RORAP35398 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RORAP35398 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RORAP35398 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.91■□□□□ 0.46
RORAP35398 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RORAP35398 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.91■□□□□ 0.46
RORAP35398 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RORAP35398 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RORAP35398 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RORAP35398 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.91■□□□□ 0.46
RORAP35398 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.91■□□□□ 0.46
RORAP35398 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RORAP35398 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.91■□□□□ 0.46
RORAP35398 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RORAP35398 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.91■□□□□ 0.46
RORAP35398 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RORAP35398 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RORAP35398 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms