Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCN1P31025 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LCN1P31025 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.5■□□□□ 0.39
LCN1P31025 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCN1P31025 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LCN1P31025 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCN1P31025 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LCN1P31025 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCN1P31025 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LCN1P31025 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.5■□□□□ 0.39
LCN1P31025 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.5■□□□□ 0.39
LCN1P31025 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.5■□□□□ 0.39
LCN1P31025 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
LCN1P31025 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.5■□□□□ 0.39
LCN1P31025 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCN1P31025 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LCN1P31025 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.5■□□□□ 0.39
LCN1P31025 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.5■□□□□ 0.39
LCN1P31025 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCN1P31025 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCN1P31025 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCN1P31025 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.5■□□□□ 0.39
LCN1P31025 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCN1P31025 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCN1P31025 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.49■□□□□ 0.39
LCN1P31025 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LCN1P31025 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LCN1P31025 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCN1P31025 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCN1P31025 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCN1P31025 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCN1P31025 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LCN1P31025 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCN1P31025 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.49■□□□□ 0.39
LCN1P31025 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCN1P31025 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.49■□□□□ 0.39
LCN1P31025 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCN1P31025 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.49■□□□□ 0.39
LCN1P31025 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LCN1P31025 AC008040.2-201ENST00000461049 708 ntBASIC17.49■□□□□ 0.39
LCN1P31025 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
LCN1P31025 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.49■□□□□ 0.39
LCN1P31025 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.49■□□□□ 0.39
LCN1P31025 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LCN1P31025 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCN1P31025 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCN1P31025 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCN1P31025 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCN1P31025 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.49■□□□□ 0.39
LCN1P31025 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
LCN1P31025 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LCN1P31025 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LCN1P31025 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 KRT17P2-201ENST00000300992 1314 ntBASIC17.48■□□□□ 0.39
LCN1P31025 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 KRT8P3-201ENST00000519669 1449 ntBASIC17.48■□□□□ 0.39
LCN1P31025 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.48■□□□□ 0.39
LCN1P31025 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.48■□□□□ 0.39
LCN1P31025 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LCN1P31025 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LCN1P31025 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LCN1P31025 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.48■□□□□ 0.39
LCN1P31025 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.48■□□□□ 0.39
LCN1P31025 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.48■□□□□ 0.39
LCN1P31025 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.48■□□□□ 0.39
LCN1P31025 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LCN1P31025 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LCN1P31025 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
LCN1P31025 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LCN1P31025 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.48■□□□□ 0.39
LCN1P31025 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.48■□□□□ 0.39
LCN1P31025 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.48■□□□□ 0.39
LCN1P31025 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LCN1P31025 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LCN1P31025 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.47■□□□□ 0.39
LCN1P31025 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.47■□□□□ 0.39
LCN1P31025 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LCN1P31025 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LCN1P31025 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LCN1P31025 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LCN1P31025 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LCN1P31025 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LCN1P31025 CA15P1-201ENST00000481698 905 ntBASIC17.47■□□□□ 0.39
LCN1P31025 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.47■□□□□ 0.39
LCN1P31025 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms