Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN6P29350 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN6P29350 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.95■□□□□ 0.46
PTPN6P29350 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN6P29350 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PTPN6P29350 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN6P29350 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.94■□□□□ 0.46
PTPN6P29350 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN6P29350 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN6P29350 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.94■□□□□ 0.46
PTPN6P29350 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.94■□□□□ 0.46
PTPN6P29350 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN6P29350 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN6P29350 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PTPN6P29350 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.94■□□□□ 0.46
PTPN6P29350 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN6P29350 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN6P29350 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN6P29350 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.94■□□□□ 0.46
PTPN6P29350 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN6P29350 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PTPN6P29350 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN6P29350 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN6P29350 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN6P29350 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.94■□□□□ 0.46
PTPN6P29350 AL160286.2-201ENST00000567150 934 ntBASIC17.94■□□□□ 0.46
PTPN6P29350 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.94■□□□□ 0.46
PTPN6P29350 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN6P29350 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN6P29350 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
PTPN6P29350 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.94■□□□□ 0.46
PTPN6P29350 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PTPN6P29350 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN6P29350 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.94■□□□□ 0.46
PTPN6P29350 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.93■□□□□ 0.46
PTPN6P29350 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN6P29350 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PTPN6P29350 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PTPN6P29350 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.93■□□□□ 0.46
PTPN6P29350 KRT8P41-201ENST00000533985 1514 ntBASIC17.93■□□□□ 0.46
PTPN6P29350 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN6P29350 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PTPN6P29350 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN6P29350 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN6P29350 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN6P29350 KRT16P5-201ENST00000455284 522 ntBASIC17.93■□□□□ 0.46
PTPN6P29350 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 RPS2P4-201ENST00000476944 856 ntBASIC17.93■□□□□ 0.46
PTPN6P29350 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.93■□□□□ 0.46
PTPN6P29350 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PTPN6P29350 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN6P29350 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN6P29350 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN6P29350 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN6P29350 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PTPN6P29350 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PTPN6P29350 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.92■□□□□ 0.46
PTPN6P29350 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
PTPN6P29350 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.92■□□□□ 0.46
PTPN6P29350 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.92■□□□□ 0.46
PTPN6P29350 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PTPN6P29350 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 MIR718-201ENST00000390190 70 ntBASIC17.92■□□□□ 0.46
PTPN6P29350 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PTPN6P29350 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.92■□□□□ 0.46
PTPN6P29350 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PTPN6P29350 RARRES2P10-201ENST00000564312 460 ntBASIC17.92■□□□□ 0.46
PTPN6P29350 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.92■□□□□ 0.46
PTPN6P29350 AC004264.1-201ENST00000608354 794 ntBASIC17.92■□□□□ 0.46
PTPN6P29350 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.92■□□□□ 0.46
PTPN6P29350 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms