Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP24386 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP24386 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP24386 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP24386 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP24386 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CHMP24386 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP24386 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHMP24386 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP24386 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CHMP24386 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP24386 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP24386 AL031598.1-201ENST00000561511 1773 ntBASIC17.66■□□□□ 0.42
CHMP24386 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP24386 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMP24386 AC135050.7-201ENST00000624508 2218 ntBASIC17.66■□□□□ 0.42
CHMP24386 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP24386 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP24386 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.66■□□□□ 0.42
CHMP24386 KSR1P1-201ENST00000446298 240 ntBASIC17.66■□□□□ 0.42
CHMP24386 SNORA78-201ENST00000459373 127 ntBASIC17.66■□□□□ 0.42
CHMP24386 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP24386 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.66■□□□□ 0.42
CHMP24386 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMP24386 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMP24386 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP24386 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP24386 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP24386 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP24386 WIZP1-201ENST00000531444 2299 ntBASIC17.66■□□□□ 0.42
CHMP24386 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP24386 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP24386 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP24386 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMP24386 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP24386 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP24386 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP24386 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 AL390961.4-201ENST00000623958 2535 ntBASIC17.65■□□□□ 0.42
CHMP24386 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CHMP24386 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.65■□□□□ 0.42
CHMP24386 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.65■□□□□ 0.42
CHMP24386 NIFKP9-201ENST00000419265 221 ntBASIC17.65■□□□□ 0.42
CHMP24386 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP24386 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP24386 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.65■□□□□ 0.42
CHMP24386 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.65■□□□□ 0.42
CHMP24386 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP24386 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.65■□□□□ 0.42
CHMP24386 MIR4785-201ENST00000585005 73 ntBASIC17.65■□□□□ 0.42
CHMP24386 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP24386 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP24386 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP24386 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP24386 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP24386 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CHMP24386 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHMP24386 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.42
CHMP24386 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.64■□□□□ 0.42
CHMP24386 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.64■□□□□ 0.42
CHMP24386 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CHMP24386 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP24386 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHMP24386 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.64■□□□□ 0.41
CHMP24386 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.64■□□□□ 0.41
CHMP24386 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP24386 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 AC090164.3-201ENST00000610780 2143 ntBASIC17.64■□□□□ 0.41
CHMP24386 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 AC093525.10-201ENST00000625130 1569 ntBASIC17.64■□□□□ 0.41
CHMP24386 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP24386 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP24386 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms