Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PRKCAP17252 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.48■□□□□ 0.39
PRKCAP17252 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.48■□□□□ 0.39
PRKCAP17252 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PRKCAP17252 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.47■□□□□ 0.39
PRKCAP17252 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.47■□□□□ 0.39
PRKCAP17252 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PRKCAP17252 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.47■□□□□ 0.39
PRKCAP17252 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.47■□□□□ 0.39
PRKCAP17252 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
PRKCAP17252 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.47■□□□□ 0.39
PRKCAP17252 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.47■□□□□ 0.39
PRKCAP17252 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.47■□□□□ 0.39
PRKCAP17252 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.47■□□□□ 0.39
PRKCAP17252 AC008550.1-201ENST00000511500 884 ntBASIC17.47■□□□□ 0.39
PRKCAP17252 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.47■□□□□ 0.39
PRKCAP17252 AC233702.5-201ENST00000584107 538 ntBASIC17.47■□□□□ 0.39
PRKCAP17252 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.47■□□□□ 0.39
PRKCAP17252 CR392000.1-201ENST00000624770 1228 ntBASIC17.47■□□□□ 0.39
PRKCAP17252 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.47■□□□□ 0.39
PRKCAP17252 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PRKCAP17252 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRKCAP17252 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PRKCAP17252 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.46■□□□□ 0.39
PRKCAP17252 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.46■□□□□ 0.39
PRKCAP17252 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.46■□□□□ 0.39
PRKCAP17252 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PRKCAP17252 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.46■□□□□ 0.39
PRKCAP17252 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.46■□□□□ 0.39
PRKCAP17252 Z85996.1-201ENST00000494644 937 ntBASIC17.46■□□□□ 0.39
PRKCAP17252 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.46■□□□□ 0.39
PRKCAP17252 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.46■□□□□ 0.39
PRKCAP17252 Z99916.2-201ENST00000604037 246 ntBASIC17.46■□□□□ 0.39
PRKCAP17252 AP001412.1-201ENST00000608405 714 ntBASIC17.46■□□□□ 0.39
PRKCAP17252 AP006294.2-201ENST00000641667 209 ntBASIC17.46■□□□□ 0.39
PRKCAP17252 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
PRKCAP17252 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
PRKCAP17252 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRKCAP17252 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
PRKCAP17252 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PRKCAP17252 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PRKCAP17252 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.46■□□□□ 0.38
PRKCAP17252 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.45■□□□□ 0.38
PRKCAP17252 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.45■□□□□ 0.38
PRKCAP17252 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.45■□□□□ 0.38
PRKCAP17252 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms