Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC23.13■■□□□ 1.29
COL11A2P13942 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A2P13942 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A2P13942 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A2P13942 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A2P13942 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A2P13942 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.13■■□□□ 1.29
COL11A2P13942 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A2P13942 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.13■■□□□ 1.29
COL11A2P13942 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A2P13942 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
COL11A2P13942 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
COL11A2P13942 BNIP3P18-201ENST00000593976 575 ntBASIC23.13■■□□□ 1.29
COL11A2P13942 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
COL11A2P13942 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.13■■□□□ 1.29
COL11A2P13942 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A2P13942 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.12■■□□□ 1.29
COL11A2P13942 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL11A2P13942 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL11A2P13942 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL11A2P13942 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
COL11A2P13942 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
COL11A2P13942 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL11A2P13942 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.12■■□□□ 1.29
COL11A2P13942 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.12■■□□□ 1.29
COL11A2P13942 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL11A2P13942 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A2P13942 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A2P13942 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A2P13942 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
COL11A2P13942 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.11■■□□□ 1.29
COL11A2P13942 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A2P13942 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A2P13942 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.11■■□□□ 1.29
COL11A2P13942 AF228730.7-201ENST00000641842 219 ntBASIC23.11■■□□□ 1.29
COL11A2P13942 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.11■■□□□ 1.29
COL11A2P13942 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
COL11A2P13942 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A2P13942 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.11■■□□□ 1.29
COL11A2P13942 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
COL11A2P13942 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.11■■□□□ 1.29
COL11A2P13942 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A2P13942 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.11■■□□□ 1.29
COL11A2P13942 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A2P13942 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.11■■□□□ 1.29
COL11A2P13942 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A2P13942 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.11■■□□□ 1.29
COL11A2P13942 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC23.11■■□□□ 1.29
COL11A2P13942 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A2P13942 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A2P13942 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A2P13942 AL590627.1-203ENST00000421194 1026 ntBASIC23.11■■□□□ 1.29
COL11A2P13942 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC23.11■■□□□ 1.29
COL11A2P13942 AC005332.3-201ENST00000589904 676 ntBASIC23.11■■□□□ 1.29
COL11A2P13942 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL11A2P13942 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL11A2P13942 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL11A2P13942 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
COL11A2P13942 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL11A2P13942 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
COL11A2P13942 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.1■■□□□ 1.29
COL11A2P13942 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.1■■□□□ 1.29
COL11A2P13942 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.1■■□□□ 1.29
COL11A2P13942 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC23.1■■□□□ 1.29
COL11A2P13942 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
COL11A2P13942 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.1■■□□□ 1.29
COL11A2P13942 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL11A2P13942 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL11A2P13942 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL11A2P13942 AL512353.2-201ENST00000448759 1962 ntBASIC23.09■■□□□ 1.29
COL11A2P13942 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL11A2P13942 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
COL11A2P13942 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL11A2P13942 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.09■■□□□ 1.29
COL11A2P13942 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL11A2P13942 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL11A2P13942 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.09■■□□□ 1.29
COL11A2P13942 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC23.09■■□□□ 1.29
COL11A2P13942 KRT18P13-201ENST00000400056 1290 ntBASIC23.09■■□□□ 1.29
COL11A2P13942 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.09■■□□□ 1.29
COL11A2P13942 AC018712.1-201ENST00000455767 687 ntBASIC23.09■■□□□ 1.29
COL11A2P13942 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC23.09■■□□□ 1.29
COL11A2P13942 AC148477.8-201ENST00000624298 468 ntBASIC23.09■■□□□ 1.29
COL11A2P13942 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.09■■□□□ 1.29
COL11A2P13942 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL11A2P13942 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL11A2P13942 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.09■■□□□ 1.29
COL11A2P13942 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL11A2P13942 KRT8P7-201ENST00000533003 1432 ntBASIC23.09■■□□□ 1.29
COL11A2P13942 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL11A2P13942 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC23.09■■□□□ 1.29
COL11A2P13942 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.09■■□□□ 1.29
COL11A2P13942 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL11A2P13942 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL11A2P13942 EMD-201ENST00000369835 966 ntTSL 3 BASIC23.08■■□□□ 1.29
COL11A2P13942 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL11A2P13942 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
COL11A2P13942 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC23.08■■□□□ 1.29
COL11A2P13942 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC23.08■■□□□ 1.29
COL11A2P13942 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms