Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
TPM1P09493 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TPM1P09493 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TPM1P09493 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TPM1P09493 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM1P09493 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.81■□□□□ 0.92
TPM1P09493 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM1P09493 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
TPM1P09493 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 AC004911.1-201ENST00000416316 871 ntBASIC20.81■□□□□ 0.92
TPM1P09493 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM1P09493 TUBB8P6-201ENST00000436895 1288 ntBASIC20.81■□□□□ 0.92
TPM1P09493 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.81■□□□□ 0.92
TPM1P09493 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.81■□□□□ 0.92
TPM1P09493 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TPM1P09493 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM1P09493 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.81■□□□□ 0.92
TPM1P09493 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
TPM1P09493 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.8■□□□□ 0.92
TPM1P09493 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
TPM1P09493 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.8■□□□□ 0.92
TPM1P09493 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.8■□□□□ 0.92
TPM1P09493 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.8■□□□□ 0.92
TPM1P09493 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.8■□□□□ 0.92
TPM1P09493 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM1P09493 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.8■□□□□ 0.92
TPM1P09493 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.79■□□□□ 0.92
TPM1P09493 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM1P09493 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TPM1P09493 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.79■□□□□ 0.92
TPM1P09493 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM1P09493 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM1P09493 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TPM1P09493 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TPM1P09493 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.79■□□□□ 0.92
TPM1P09493 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM1P09493 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM1P09493 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.79■□□□□ 0.92
TPM1P09493 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TPM1P09493 KRT18P16-201ENST00000510337 1294 ntBASIC20.79■□□□□ 0.92
TPM1P09493 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.79■□□□□ 0.92
TPM1P09493 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TPM1P09493 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.79■□□□□ 0.92
TPM1P09493 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.79■□□□□ 0.92
TPM1P09493 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM1P09493 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM1P09493 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TPM1P09493 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM1P09493 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.79■□□□□ 0.92
TPM1P09493 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM1P09493 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
TPM1P09493 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM1P09493 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TPM1P09493 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM1P09493 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TPM1P09493 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM1P09493 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM1P09493 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.78■□□□□ 0.92
TPM1P09493 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM1P09493 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TPM1P09493 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM1P09493 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM1P09493 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM1P09493 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
TPM1P09493 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.78■□□□□ 0.92
TPM1P09493 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM1P09493 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM1P09493 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TPM1P09493 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.78■□□□□ 0.92
TPM1P09493 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.78■□□□□ 0.92
TPM1P09493 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM1P09493 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.78■□□□□ 0.92
TPM1P09493 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms