Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CTSDP07339 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.71■□□□□ 0.1
CTSDP07339 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CTSDP07339 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CTSDP07339 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.7■□□□□ 0.1
CTSDP07339 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTSDP07339 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.7■□□□□ 0.1
CTSDP07339 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CTSDP07339 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSDP07339 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.7■□□□□ 0.1
CTSDP07339 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSDP07339 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.7■□□□□ 0.1
CTSDP07339 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSDP07339 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTSDP07339 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CTSDP07339 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CTSDP07339 TSPY21P-201ENST00000433481 731 ntBASIC15.7■□□□□ 0.1
CTSDP07339 RPS2P52-201ENST00000469610 820 ntBASIC15.7■□□□□ 0.1
CTSDP07339 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.7■□□□□ 0.1
CTSDP07339 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.7■□□□□ 0.1
CTSDP07339 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSDP07339 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTSDP07339 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CTSDP07339 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSDP07339 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSDP07339 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSDP07339 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSDP07339 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.7■□□□□ 0.1
CTSDP07339 AC124283.5-201ENST00000624661 1809 ntBASIC15.7■□□□□ 0.1
CTSDP07339 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSDP07339 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.7■□□□□ 0.1
CTSDP07339 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTSDP07339 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.7■□□□□ 0.1
CTSDP07339 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
CTSDP07339 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.69■□□□□ 0.1
CTSDP07339 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.69■□□□□ 0.1
CTSDP07339 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.69■□□□□ 0.1
CTSDP07339 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.69■□□□□ 0.1
CTSDP07339 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.69■□□□□ 0.1
CTSDP07339 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 KRT18P16-201ENST00000510337 1294 ntBASIC15.69■□□□□ 0.1
CTSDP07339 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.69■□□□□ 0.1
CTSDP07339 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.69■□□□□ 0.1
CTSDP07339 AL121906.2-201ENST00000621597 723 ntBASIC15.69■□□□□ 0.1
CTSDP07339 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CTSDP07339 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.69■□□□□ 0.1
CTSDP07339 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CTSDP07339 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CTSDP07339 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CTSDP07339 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSDP07339 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CTSDP07339 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.68■□□□□ 0.1
CTSDP07339 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CTSDP07339 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CTSDP07339 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
CTSDP07339 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.68■□□□□ 0.1
CTSDP07339 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.68■□□□□ 0.1
CTSDP07339 AC006015.1-201ENST00000429970 570 ntBASIC15.68■□□□□ 0.1
CTSDP07339 TUBB8P6-201ENST00000436895 1288 ntBASIC15.68■□□□□ 0.1
CTSDP07339 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CTSDP07339 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.68■□□□□ 0.1
CTSDP07339 IKBKGP1-201ENST00000612193 1073 ntBASIC15.68■□□□□ 0.1
CTSDP07339 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.68■□□□□ 0.1
CTSDP07339 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.68■□□□□ 0.1
CTSDP07339 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 ESPNP-201ENST00000270691 2015 ntBASIC15.68■□□□□ 0.1
CTSDP07339 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSDP07339 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CTSDP07339 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms