Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TPM3P06753 AC104417.2-201ENST00000562989 1793 ntBASIC21.19■□□□□ 0.98
TPM3P06753 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TPM3P06753 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.19■□□□□ 0.98
TPM3P06753 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TPM3P06753 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.19■□□□□ 0.98
TPM3P06753 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TPM3P06753 AC073592.3-201ENST00000625118 1834 ntBASIC21.19■□□□□ 0.98
TPM3P06753 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TPM3P06753 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
TPM3P06753 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TPM3P06753 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TPM3P06753 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.19■□□□□ 0.98
TPM3P06753 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TPM3P06753 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TPM3P06753 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.19■□□□□ 0.98
TPM3P06753 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TPM3P06753 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TPM3P06753 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TPM3P06753 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TPM3P06753 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
TPM3P06753 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPM3P06753 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.18■□□□□ 0.98
TPM3P06753 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPM3P06753 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPM3P06753 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPM3P06753 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TPM3P06753 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TPM3P06753 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPM3P06753 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPM3P06753 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPM3P06753 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPM3P06753 ESPNP-201ENST00000270691 2015 ntBASIC21.18■□□□□ 0.98
TPM3P06753 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPM3P06753 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.18■□□□□ 0.98
TPM3P06753 AC006015.1-201ENST00000429970 570 ntBASIC21.18■□□□□ 0.98
TPM3P06753 AC073210.2-201ENST00000430369 194 ntBASIC21.18■□□□□ 0.98
TPM3P06753 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.18■□□□□ 0.98
TPM3P06753 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPM3P06753 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPM3P06753 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.18■□□□□ 0.98
TPM3P06753 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TPM3P06753 SIRPAP1-201ENST00000448467 1770 ntBASIC21.18■□□□□ 0.98
TPM3P06753 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPM3P06753 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM3P06753 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM3P06753 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.17■□□□□ 0.98
TPM3P06753 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM3P06753 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.17■□□□□ 0.98
TPM3P06753 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TPM3P06753 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM3P06753 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TPM3P06753 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.17■□□□□ 0.98
TPM3P06753 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM3P06753 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM3P06753 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TPM3P06753 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TPM3P06753 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM3P06753 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.17■□□□□ 0.98
TPM3P06753 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM3P06753 SDHAP1-207ENST00000440850 2000 ntBASIC21.17■□□□□ 0.98
TPM3P06753 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM3P06753 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TPM3P06753 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM3P06753 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.17■□□□□ 0.98
TPM3P06753 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM3P06753 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.17■□□□□ 0.98
TPM3P06753 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TPM3P06753 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TPM3P06753 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM3P06753 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
TPM3P06753 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPM3P06753 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TPM3P06753 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPM3P06753 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM3P06753 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPM3P06753 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPM3P06753 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM3P06753 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.16■□□□□ 0.98
TPM3P06753 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.16■□□□□ 0.98
TPM3P06753 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM3P06753 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.16■□□□□ 0.98
TPM3P06753 MIR6821-201ENST00000617625 74 ntBASIC21.16■□□□□ 0.98
TPM3P06753 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TPM3P06753 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPM3P06753 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM3P06753 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TPM3P06753 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM3P06753 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM3P06753 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.15■□□□□ 0.98
TPM3P06753 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC21.15■□□□□ 0.98
TPM3P06753 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.15■□□□□ 0.98
TPM3P06753 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TPM3P06753 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPM3P06753 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TPM3P06753 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.15■□□□□ 0.98
TPM3P06753 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPM3P06753 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPM3P06753 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.15■□□□□ 0.98
TPM3P06753 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms