Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.89■□□□□ 0.13
CD74P04233 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.88■□□□□ 0.13
CD74P04233 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.88■□□□□ 0.13
CD74P04233 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.88■□□□□ 0.13
CD74P04233 KRT18P16-201ENST00000510337 1294 ntBASIC15.88■□□□□ 0.13
CD74P04233 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.88■□□□□ 0.13
CD74P04233 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CD74P04233 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.88■□□□□ 0.13
CD74P04233 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.88■□□□□ 0.13
CD74P04233 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.88■□□□□ 0.13
CD74P04233 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
CD74P04233 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CD74P04233 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CD74P04233 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CD74P04233 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.88■□□□□ 0.13
CD74P04233 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.88■□□□□ 0.13
CD74P04233 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD74P04233 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CD74P04233 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CD74P04233 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.87■□□□□ 0.13
CD74P04233 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
CD74P04233 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CD74P04233 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.87■□□□□ 0.13
CD74P04233 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.87■□□□□ 0.13
CD74P04233 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.87■□□□□ 0.13
CD74P04233 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.87■□□□□ 0.13
CD74P04233 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.87■□□□□ 0.13
CD74P04233 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CD74P04233 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.87■□□□□ 0.13
CD74P04233 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.87■□□□□ 0.13
CD74P04233 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.87■□□□□ 0.13
CD74P04233 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.87■□□□□ 0.13
CD74P04233 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.87■□□□□ 0.13
CD74P04233 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.87■□□□□ 0.13
CD74P04233 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.87■□□□□ 0.13
CD74P04233 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CD74P04233 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.87■□□□□ 0.13
CD74P04233 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.87■□□□□ 0.13
CD74P04233 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD74P04233 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD74P04233 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.86■□□□□ 0.13
CD74P04233 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.86■□□□□ 0.13
CD74P04233 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD74P04233 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD74P04233 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CD74P04233 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CD74P04233 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
CD74P04233 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD74P04233 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CD74P04233 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.86■□□□□ 0.13
CD74P04233 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CD74P04233 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD74P04233 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CD74P04233 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CD74P04233 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.86■□□□□ 0.13
CD74P04233 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD74P04233 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CD74P04233 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD74P04233 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD74P04233 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.86■□□□□ 0.13
CD74P04233 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD74P04233 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.86■□□□□ 0.13
CD74P04233 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.86■□□□□ 0.13
CD74P04233 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.86■□□□□ 0.13
CD74P04233 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms