Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 CRYGFP-201ENST00000418459 633 ntBASIC14.88□□□□□ -0.03
TRGV3P03979 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.88□□□□□ -0.03
TRGV3P03979 RBM17P1-201ENST00000453646 1190 ntBASIC14.88□□□□□ -0.03
TRGV3P03979 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV3P03979 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRGV3P03979 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
TRGV3P03979 AL355075.4-201ENST00000554988 638 ntBASIC14.88□□□□□ -0.03
TRGV3P03979 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.88□□□□□ -0.03
TRGV3P03979 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
TRGV3P03979 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV3P03979 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV3P03979 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV3P03979 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV3P03979 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV3P03979 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV3P03979 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV3P03979 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.88□□□□□ -0.03
TRGV3P03979 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRGV3P03979 AC018445.3-201ENST00000624177 1945 ntBASIC14.88□□□□□ -0.03
TRGV3P03979 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.87□□□□□ -0.03
TRGV3P03979 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.87□□□□□ -0.03
TRGV3P03979 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.87□□□□□ -0.03
TRGV3P03979 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.87□□□□□ -0.03
TRGV3P03979 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.87□□□□□ -0.03
TRGV3P03979 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.87□□□□□ -0.03
TRGV3P03979 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.87□□□□□ -0.03
TRGV3P03979 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 AC098818.2-201ENST00000564925 2320 ntBASIC14.87□□□□□ -0.03
TRGV3P03979 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.87□□□□□ -0.03
TRGV3P03979 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.87□□□□□ -0.03
TRGV3P03979 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRGV3P03979 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRGV3P03979 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.87□□□□□ -0.03
TRGV3P03979 MFAP1P1-201ENST00000442257 1255 ntBASIC14.87□□□□□ -0.03
TRGV3P03979 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.87□□□□□ -0.03
TRGV3P03979 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.87□□□□□ -0.03
TRGV3P03979 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.87□□□□□ -0.03
TRGV3P03979 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.87□□□□□ -0.03
TRGV3P03979 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.87□□□□□ -0.03
TRGV3P03979 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.87□□□□□ -0.03
TRGV3P03979 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.87□□□□□ -0.03
TRGV3P03979 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.87□□□□□ -0.03
TRGV3P03979 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.87□□□□□ -0.03
TRGV3P03979 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.87□□□□□ -0.03
TRGV3P03979 IRX1P1-201ENST00000438849 1838 ntBASIC14.87□□□□□ -0.03
TRGV3P03979 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.87□□□□□ -0.03
TRGV3P03979 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV3P03979 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRGV3P03979 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRGV3P03979 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.86□□□□□ -0.03
TRGV3P03979 FP475955.4-201ENST00000623131 1990 ntBASIC14.86□□□□□ -0.03
TRGV3P03979 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRGV3P03979 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRGV3P03979 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.86□□□□□ -0.03
TRGV3P03979 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.86□□□□□ -0.03
TRGV3P03979 CKBP1-201ENST00000565489 1086 ntBASIC14.86□□□□□ -0.03
TRGV3P03979 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.86□□□□□ -0.03
TRGV3P03979 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.86□□□□□ -0.03
TRGV3P03979 AP000525.1-201ENST00000608286 694 ntBASIC14.86□□□□□ -0.03
TRGV3P03979 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRGV3P03979 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.86□□□□□ -0.03
TRGV3P03979 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRGV3P03979 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRGV3P03979 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV3P03979 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.86□□□□□ -0.03
TRGV3P03979 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms