Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV12-3P01733 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV12-3P01733 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV12-3P01733 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV12-3P01733 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV12-3P01733 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV12-3P01733 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV12-3P01733 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV12-3P01733 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV12-3P01733 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV12-3P01733 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
TRBV12-3P01733 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV12-3P01733 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV12-3P01733 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV12-3P01733 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV12-3P01733 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV12-3P01733 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV12-3P01733 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV12-3P01733 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.6□□□□□ -0.07
TRBV12-3P01733 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV12-3P01733 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV12-3P01733 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV12-3P01733 NAPSB-206ENST00000562112 1266 ntBASIC14.6□□□□□ -0.07
TRBV12-3P01733 AC008622.2-201ENST00000617006 1229 ntBASIC14.6□□□□□ -0.07
TRBV12-3P01733 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
TRBV12-3P01733 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRBV12-3P01733 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV12-3P01733 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV12-3P01733 AC006333.2-201ENST00000607957 2099 ntBASIC14.6□□□□□ -0.07
TRBV12-3P01733 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV12-3P01733 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV12-3P01733 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRBV12-3P01733 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV12-3P01733 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV12-3P01733 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRBV12-3P01733 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV12-3P01733 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV12-3P01733 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV12-3P01733 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV12-3P01733 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV12-3P01733 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRBV12-3P01733 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.59□□□□□ -0.07
TRBV12-3P01733 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.59□□□□□ -0.07
TRBV12-3P01733 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRBV12-3P01733 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.59□□□□□ -0.07
TRBV12-3P01733 C2orf69P3-201ENST00000565542 1120 ntBASIC14.59□□□□□ -0.07
TRBV12-3P01733 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.59□□□□□ -0.07
TRBV12-3P01733 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRBV12-3P01733 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRBV12-3P01733 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRBV12-3P01733 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV12-3P01733 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRBV12-3P01733 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.58□□□□□ -0.07
TRBV12-3P01733 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRBV12-3P01733 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRBV12-3P01733 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
TRBV12-3P01733 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRBV12-3P01733 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV12-3P01733 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV12-3P01733 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV12-3P01733 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV12-3P01733 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV12-3P01733 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV12-3P01733 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV12-3P01733 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 AC133561.5-201ENST00000635547 218 ntBASIC14.58□□□□□ -0.08
TRBV12-3P01733 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV12-3P01733 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV12-3P01733 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
TRBV12-3P01733 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms