Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3O95983 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3O95983 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3O95983 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
MBD3O95983 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3O95983 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.67■■□□□ 1.06
MBD3O95983 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.67■■□□□ 1.06
MBD3O95983 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.67■■□□□ 1.06
MBD3O95983 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.67■■□□□ 1.06
MBD3O95983 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.67■■□□□ 1.06
MBD3O95983 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3O95983 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
MBD3O95983 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3O95983 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3O95983 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3O95983 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.67■■□□□ 1.06
MBD3O95983 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.67■■□□□ 1.06
MBD3O95983 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3O95983 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.67■■□□□ 1.06
MBD3O95983 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3O95983 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3O95983 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3O95983 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3O95983 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3O95983 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
MBD3O95983 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
MBD3O95983 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
MBD3O95983 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.66■■□□□ 1.06
MBD3O95983 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.66■■□□□ 1.06
MBD3O95983 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.66■■□□□ 1.06
MBD3O95983 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.66■■□□□ 1.06
MBD3O95983 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.66■■□□□ 1.06
MBD3O95983 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.66■■□□□ 1.06
MBD3O95983 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.66■■□□□ 1.06
MBD3O95983 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3O95983 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MBD3O95983 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MBD3O95983 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
MBD3O95983 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.65■■□□□ 1.06
MBD3O95983 LINC00896-202ENST00000609602 2128 ntBASIC21.65■■□□□ 1.06
MBD3O95983 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.65■■□□□ 1.06
MBD3O95983 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
MBD3O95983 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MBD3O95983 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MBD3O95983 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MBD3O95983 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
MBD3O95983 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
MBD3O95983 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
MBD3O95983 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.65■■□□□ 1.06
MBD3O95983 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MBD3O95983 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.65■■□□□ 1.06
MBD3O95983 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MBD3O95983 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MBD3O95983 ZNRF2P3-201ENST00000424200 374 ntBASIC21.65■■□□□ 1.06
MBD3O95983 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
MBD3O95983 HEIH-201ENST00000623091 1652 ntBASIC21.65■■□□□ 1.06
MBD3O95983 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MBD3O95983 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MBD3O95983 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MBD3O95983 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MBD3O95983 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.65■■□□□ 1.06
MBD3O95983 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
MBD3O95983 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
MBD3O95983 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.64■■□□□ 1.06
MBD3O95983 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
MBD3O95983 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
MBD3O95983 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MBD3O95983 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MBD3O95983 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MBD3O95983 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MBD3O95983 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.64■■□□□ 1.05
MBD3O95983 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.64■■□□□ 1.05
MBD3O95983 SLC25A6P5-201ENST00000435663 894 ntBASIC21.64■■□□□ 1.05
MBD3O95983 TUBB8P6-201ENST00000436895 1288 ntBASIC21.64■■□□□ 1.05
MBD3O95983 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.64■■□□□ 1.05
MBD3O95983 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
MBD3O95983 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MBD3O95983 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MBD3O95983 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.64■■□□□ 1.05
MBD3O95983 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
MBD3O95983 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
MBD3O95983 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.64■■□□□ 1.05
MBD3O95983 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MBD3O95983 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MBD3O95983 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms