Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC8.43□□□□□ -1.06
USH2AO75445 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC8.43□□□□□ -1.06
USH2AO75445 AC093028.1-201ENST00000622998 982 ntBASIC8.43□□□□□ -1.06
USH2AO75445 AC124864.1-201ENST00000623408 392 ntBASIC8.43□□□□□ -1.06
USH2AO75445 AF228730.6-201ENST00000641497 218 ntBASIC8.43□□□□□ -1.06
USH2AO75445 AC084121.3-201ENST00000641716 218 ntBASIC8.43□□□□□ -1.06
USH2AO75445 AC105233.6-201ENST00000642093 218 ntBASIC8.43□□□□□ -1.06
USH2AO75445 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
USH2AO75445 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC8.43□□□□□ -1.06
USH2AO75445 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC8.43□□□□□ -1.06
USH2AO75445 AC005034.1-201ENST00000426657 489 ntBASIC8.43□□□□□ -1.06
USH2AO75445 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC8.43□□□□□ -1.06
USH2AO75445 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
USH2AO75445 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC8.43□□□□□ -1.06
USH2AO75445 FEM1AP1-201ENST00000431297 1995 ntBASIC8.43□□□□□ -1.06
USH2AO75445 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 AC145285.3-201ENST00000564603 959 ntBASIC8.43□□□□□ -1.06
USH2AO75445 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 AL096865.1-201ENST00000606796 927 ntBASIC8.43□□□□□ -1.06
USH2AO75445 CAND2-206ENST00000626378 333 ntTSL 5 BASIC8.43□□□□□ -1.06
USH2AO75445 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC8.42□□□□□ -1.06
USH2AO75445 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC8.42□□□□□ -1.06
USH2AO75445 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC8.42□□□□□ -1.06
USH2AO75445 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
USH2AO75445 RPS2P28-201ENST00000314255 741 ntBASIC8.42□□□□□ -1.06
USH2AO75445 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC8.42□□□□□ -1.06
USH2AO75445 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC8.42□□□□□ -1.06
USH2AO75445 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC8.42□□□□□ -1.06
USH2AO75445 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC8.42□□□□□ -1.06
USH2AO75445 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
USH2AO75445 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC8.42□□□□□ -1.06
USH2AO75445 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
USH2AO75445 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC8.42□□□□□ -1.06
USH2AO75445 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
USH2AO75445 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
USH2AO75445 CFL1-202ENST00000524553 860 ntTSL 2 BASIC8.42□□□□□ -1.06
USH2AO75445 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC8.42□□□□□ -1.06
USH2AO75445 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC8.42□□□□□ -1.06
USH2AO75445 Z83851.2-201ENST00000609564 659 ntBASIC8.42□□□□□ -1.06
USH2AO75445 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC8.42□□□□□ -1.06
USH2AO75445 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
USH2AO75445 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC8.42□□□□□ -1.06
USH2AO75445 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC8.42□□□□□ -1.06
USH2AO75445 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
USH2AO75445 DUX4L17-201ENST00000557360 1267 ntBASIC8.42□□□□□ -1.06
USH2AO75445 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
USH2AO75445 WWC2-AS2-201ENST00000578387 2183 ntBASIC8.42□□□□□ -1.06
USH2AO75445 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC8.42□□□□□ -1.06
USH2AO75445 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
USH2AO75445 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
USH2AO75445 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC8.41□□□□□ -1.06
USH2AO75445 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC8.41□□□□□ -1.06
USH2AO75445 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
USH2AO75445 MEIS3P1-201ENST00000495167 958 ntBASIC8.41□□□□□ -1.06
USH2AO75445 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC8.41□□□□□ -1.06
USH2AO75445 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
USH2AO75445 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms