Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
IDH3BO43837 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IDH3BO43837 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
IDH3BO43837 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
IDH3BO43837 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
IDH3BO43837 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.34■□□□□ 0.37
IDH3BO43837 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
IDH3BO43837 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.34■□□□□ 0.37
IDH3BO43837 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.34■□□□□ 0.37
IDH3BO43837 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.34■□□□□ 0.37
IDH3BO43837 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 AC060766.5-201ENST00000590539 871 ntBASIC17.34■□□□□ 0.37
IDH3BO43837 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.34■□□□□ 0.37
IDH3BO43837 AC120498.8-201ENST00000614275 531 ntBASIC17.34■□□□□ 0.37
IDH3BO43837 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
IDH3BO43837 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
IDH3BO43837 AL121829.2-201ENST00000620908 328 ntBASIC17.34■□□□□ 0.37
IDH3BO43837 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3BO43837 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
IDH3BO43837 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IDH3BO43837 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.33■□□□□ 0.37
IDH3BO43837 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IDH3BO43837 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
IDH3BO43837 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IDH3BO43837 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IDH3BO43837 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
IDH3BO43837 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
IDH3BO43837 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IDH3BO43837 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IDH3BO43837 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IDH3BO43837 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.33■□□□□ 0.36
IDH3BO43837 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.33■□□□□ 0.36
IDH3BO43837 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IDH3BO43837 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IDH3BO43837 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.33■□□□□ 0.36
IDH3BO43837 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.33■□□□□ 0.36
IDH3BO43837 GUSBP6-202ENST00000438529 1198 ntBASIC17.33■□□□□ 0.36
IDH3BO43837 KRT18P16-201ENST00000510337 1294 ntBASIC17.33■□□□□ 0.36
IDH3BO43837 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
IDH3BO43837 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.33■□□□□ 0.36
IDH3BO43837 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
IDH3BO43837 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IDH3BO43837 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IDH3BO43837 CROCCP3-202ENST00000420820 1947 ntBASIC17.33■□□□□ 0.36
IDH3BO43837 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
IDH3BO43837 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
IDH3BO43837 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IDH3BO43837 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IDH3BO43837 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IDH3BO43837 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
IDH3BO43837 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IDH3BO43837 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
IDH3BO43837 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
IDH3BO43837 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IDH3BO43837 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IDH3BO43837 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
IDH3BO43837 PNMA6B-201ENST00000538162 1200 ntBASIC17.32■□□□□ 0.36
IDH3BO43837 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.32■□□□□ 0.36
IDH3BO43837 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IDH3BO43837 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IDH3BO43837 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IDH3BO43837 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
IDH3BO43837 PRORSD1P-202ENST00000563365 2154 ntBASIC17.32■□□□□ 0.36
IDH3BO43837 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IDH3BO43837 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IDH3BO43837 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IDH3BO43837 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
IDH3BO43837 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
IDH3BO43837 AC135050.7-201ENST00000624508 2218 ntBASIC17.31■□□□□ 0.36
IDH3BO43837 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
IDH3BO43837 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.31■□□□□ 0.36
IDH3BO43837 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.31■□□□□ 0.36
IDH3BO43837 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.31■□□□□ 0.36
IDH3BO43837 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.31■□□□□ 0.36
IDH3BO43837 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.31■□□□□ 0.36
IDH3BO43837 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.31■□□□□ 0.36
IDH3BO43837 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.31■□□□□ 0.36
IDH3BO43837 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
IDH3BO43837 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IDH3BO43837 OR6D1P-202ENST00000641007 5290 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms