Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK2O00526 ID1-201ENST00000376105 1233 ntBASIC15.18■□□□□ 0.02
UPK2O00526 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.18■□□□□ 0.02
UPK2O00526 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
UPK2O00526 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK2O00526 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.18■□□□□ 0.02
UPK2O00526 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.18■□□□□ 0.02
UPK2O00526 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
UPK2O00526 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK2O00526 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK2O00526 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK2O00526 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UPK2O00526 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK2O00526 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UPK2O00526 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.17■□□□□ 0.02
UPK2O00526 AC135050.7-201ENST00000624508 2218 ntBASIC15.17■□□□□ 0.02
UPK2O00526 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK2O00526 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UPK2O00526 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK2O00526 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.17■□□□□ 0.02
UPK2O00526 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK2O00526 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.17■□□□□ 0.02
UPK2O00526 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK2O00526 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
UPK2O00526 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK2O00526 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK2O00526 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK2O00526 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK2O00526 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
UPK2O00526 Z85996.1-201ENST00000494644 937 ntBASIC15.17■□□□□ 0.02
UPK2O00526 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.17■□□□□ 0.02
UPK2O00526 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK2O00526 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
UPK2O00526 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK2O00526 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK2O00526 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK2O00526 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK2O00526 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.17■□□□□ 0.02
UPK2O00526 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
UPK2O00526 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
UPK2O00526 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
UPK2O00526 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK2O00526 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK2O00526 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK2O00526 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
UPK2O00526 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK2O00526 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
UPK2O00526 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK2O00526 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK2O00526 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.16■□□□□ 0.02
UPK2O00526 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK2O00526 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK2O00526 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.16■□□□□ 0.02
UPK2O00526 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
UPK2O00526 POU5F1P3-201ENST00000428824 1078 ntBASIC15.16■□□□□ 0.02
UPK2O00526 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.16■□□□□ 0.02
UPK2O00526 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.16■□□□□ 0.02
UPK2O00526 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.16■□□□□ 0.02
UPK2O00526 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.16■□□□□ 0.02
UPK2O00526 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.16■□□□□ 0.02
UPK2O00526 AL445675.2-201ENST00000620291 557 ntBASIC15.16■□□□□ 0.02
UPK2O00526 AC131212.4-201ENST00000623606 975 ntBASIC15.16■□□□□ 0.02
UPK2O00526 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.16■□□□□ 0.02
UPK2O00526 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK2O00526 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK2O00526 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.16■□□□□ 0.02
UPK2O00526 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK2O00526 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK2O00526 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.16■□□□□ 0.02
UPK2O00526 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.16■□□□□ 0.02
UPK2O00526 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK2O00526 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UPK2O00526 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK2O00526 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK2O00526 RCC2P6-201ENST00000526625 1557 ntBASIC15.15■□□□□ 0.02
UPK2O00526 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK2O00526 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.15■□□□□ 0.02
UPK2O00526 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UPK2O00526 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
UPK2O00526 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.15■□□□□ 0.02
UPK2O00526 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK2O00526 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UPK2O00526 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK2O00526 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK2O00526 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
UPK2O00526 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.15■□□□□ 0.02
UPK2O00526 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK2O00526 ESRRAP1-201ENST00000400596 1257 ntBASIC15.15■□□□□ 0.02
UPK2O00526 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.15■□□□□ 0.02
UPK2O00526 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK2O00526 AC133681.1-201ENST00000465482 601 ntBASIC15.15■□□□□ 0.02
UPK2O00526 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
UPK2O00526 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
UPK2O00526 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.15■□□□□ 0.02
UPK2O00526 KRT18P6-201ENST00000555540 1265 ntBASIC15.15■□□□□ 0.02
UPK2O00526 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.15■□□□□ 0.02
UPK2O00526 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.15■□□□□ 0.02
UPK2O00526 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.15■□□□□ 0.02
UPK2O00526 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.15■□□□□ 0.02
UPK2O00526 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms