Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DFFAO00273 BX323043.1-201ENST00000641006 1765 ntBASIC19.44■□□□□ 0.7
DFFAO00273 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DFFAO00273 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DFFAO00273 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DFFAO00273 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DFFAO00273 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
DFFAO00273 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
DFFAO00273 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.43■□□□□ 0.7
DFFAO00273 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.43■□□□□ 0.7
DFFAO00273 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.43■□□□□ 0.7
DFFAO00273 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.43■□□□□ 0.7
DFFAO00273 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.43■□□□□ 0.7
DFFAO00273 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.43■□□□□ 0.7
DFFAO00273 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
DFFAO00273 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DFFAO00273 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.43■□□□□ 0.7
DFFAO00273 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.43■□□□□ 0.7
DFFAO00273 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.42■□□□□ 0.7
DFFAO00273 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
DFFAO00273 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.42■□□□□ 0.7
DFFAO00273 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
DFFAO00273 AC006333.2-201ENST00000607957 2099 ntBASIC19.42■□□□□ 0.7
DFFAO00273 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DFFAO00273 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DFFAO00273 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.42■□□□□ 0.7
DFFAO00273 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.42■□□□□ 0.7
DFFAO00273 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.42■□□□□ 0.7
DFFAO00273 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.42■□□□□ 0.7
DFFAO00273 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.42■□□□□ 0.7
DFFAO00273 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DFFAO00273 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DFFAO00273 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DFFAO00273 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.42■□□□□ 0.7
DFFAO00273 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DFFAO00273 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.42■□□□□ 0.7
DFFAO00273 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DFFAO00273 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DFFAO00273 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DFFAO00273 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.41■□□□□ 0.7
DFFAO00273 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DFFAO00273 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DFFAO00273 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
DFFAO00273 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.41■□□□□ 0.7
DFFAO00273 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
DFFAO00273 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DFFAO00273 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DFFAO00273 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
DFFAO00273 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DFFAO00273 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.41■□□□□ 0.7
DFFAO00273 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DFFAO00273 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.41■□□□□ 0.7
DFFAO00273 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.41■□□□□ 0.7
DFFAO00273 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DFFAO00273 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.41■□□□□ 0.7
DFFAO00273 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DFFAO00273 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
DFFAO00273 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DFFAO00273 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DFFAO00273 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DFFAO00273 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.41■□□□□ 0.7
DFFAO00273 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DFFAO00273 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
DFFAO00273 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DFFAO00273 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DFFAO00273 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DFFAO00273 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DFFAO00273 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DFFAO00273 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
DFFAO00273 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DFFAO00273 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DFFAO00273 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DFFAO00273 AP005242.2-201ENST00000580065 1175 ntBASIC19.4■□□□□ 0.7
DFFAO00273 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DFFAO00273 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
DFFAO00273 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.4■□□□□ 0.7
DFFAO00273 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DFFAO00273 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
DFFAO00273 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DFFAO00273 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DFFAO00273 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
DFFAO00273 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms