Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.72■□□□□ 0.59
TLR4O00206 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.72■□□□□ 0.59
TLR4O00206 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TLR4O00206 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR4O00206 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR4O00206 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TLR4O00206 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TLR4O00206 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.72■□□□□ 0.59
TLR4O00206 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR4O00206 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.72■□□□□ 0.59
TLR4O00206 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR4O00206 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR4O00206 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR4O00206 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR4O00206 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
TLR4O00206 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TLR4O00206 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TLR4O00206 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR4O00206 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TLR4O00206 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.71■□□□□ 0.59
TLR4O00206 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR4O00206 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TLR4O00206 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.71■□□□□ 0.59
TLR4O00206 AC083849.1-201ENST00000615227 514 ntBASIC18.71■□□□□ 0.59
TLR4O00206 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TLR4O00206 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.71■□□□□ 0.59
TLR4O00206 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.71■□□□□ 0.59
TLR4O00206 SDHAP1-207ENST00000440850 2000 ntBASIC18.71■□□□□ 0.59
TLR4O00206 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR4O00206 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
TLR4O00206 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TLR4O00206 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TLR4O00206 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.71■□□□□ 0.58
TLR4O00206 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TLR4O00206 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TLR4O00206 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TLR4O00206 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TLR4O00206 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TLR4O00206 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.7■□□□□ 0.58
TLR4O00206 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.7■□□□□ 0.58
TLR4O00206 KRT18P48-201ENST00000434763 852 ntBASIC18.7■□□□□ 0.58
TLR4O00206 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.7■□□□□ 0.58
TLR4O00206 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.7■□□□□ 0.58
TLR4O00206 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TLR4O00206 KRT126P-201ENST00000549467 1181 ntBASIC18.7■□□□□ 0.58
TLR4O00206 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.7■□□□□ 0.58
TLR4O00206 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.7■□□□□ 0.58
TLR4O00206 AC069148.1-201ENST00000608741 768 ntBASIC18.7■□□□□ 0.58
TLR4O00206 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TLR4O00206 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TLR4O00206 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TLR4O00206 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TLR4O00206 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.7■□□□□ 0.58
TLR4O00206 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.7■□□□□ 0.58
TLR4O00206 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TLR4O00206 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TLR4O00206 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.69■□□□□ 0.58
TLR4O00206 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.69■□□□□ 0.58
TLR4O00206 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.69■□□□□ 0.58
TLR4O00206 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TLR4O00206 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.69■□□□□ 0.58
TLR4O00206 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TLR4O00206 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.69■□□□□ 0.58
TLR4O00206 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 SPDYE15P-201ENST00000424157 909 ntBASIC18.69■□□□□ 0.58
TLR4O00206 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.69■□□□□ 0.58
TLR4O00206 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.69■□□□□ 0.58
TLR4O00206 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TLR4O00206 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.69■□□□□ 0.58
TLR4O00206 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.69■□□□□ 0.58
TLR4O00206 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
TLR4O00206 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.69■□□□□ 0.58
TLR4O00206 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
TLR4O00206 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TLR4O00206 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TLR4O00206 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.69■□□□□ 0.58
TLR4O00206 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR4O00206 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TLR4O00206 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.68■□□□□ 0.58
TLR4O00206 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR4O00206 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.68■□□□□ 0.58
TLR4O00206 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms