Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM1O00151 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.99■□□□□ 0.47
PDLIM1O00151 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.99■□□□□ 0.47
PDLIM1O00151 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
PDLIM1O00151 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.99■□□□□ 0.47
PDLIM1O00151 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.99■□□□□ 0.47
PDLIM1O00151 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.99■□□□□ 0.47
PDLIM1O00151 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM1O00151 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM1O00151 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
PDLIM1O00151 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM1O00151 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM1O00151 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.99■□□□□ 0.47
PDLIM1O00151 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PDLIM1O00151 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.98■□□□□ 0.47
PDLIM1O00151 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PDLIM1O00151 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM1O00151 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM1O00151 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
PDLIM1O00151 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PDLIM1O00151 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM1O00151 AL589743.5-201ENST00000616611 1050 ntBASIC17.98■□□□□ 0.47
PDLIM1O00151 MYC-209ENST00000641252 345 ntBASIC17.98■□□□□ 0.47
PDLIM1O00151 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PDLIM1O00151 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PDLIM1O00151 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM1O00151 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM1O00151 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
PDLIM1O00151 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM1O00151 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM1O00151 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM1O00151 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.98■□□□□ 0.47
PDLIM1O00151 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM1O00151 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM1O00151 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM1O00151 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM1O00151 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM1O00151 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM1O00151 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM1O00151 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM1O00151 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.97■□□□□ 0.47
PDLIM1O00151 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
PDLIM1O00151 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM1O00151 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PDLIM1O00151 HLA-G-202ENST00000376815 851 ntBASIC17.97■□□□□ 0.47
PDLIM1O00151 HLA-G-203ENST00000376818 1127 ntBASIC17.97■□□□□ 0.47
PDLIM1O00151 LSM12P1-201ENST00000411836 588 ntBASIC17.97■□□□□ 0.47
PDLIM1O00151 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.97■□□□□ 0.47
PDLIM1O00151 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM1O00151 AC091874.3-201ENST00000512672 1195 ntBASIC17.97■□□□□ 0.47
PDLIM1O00151 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.97■□□□□ 0.47
PDLIM1O00151 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PDLIM1O00151 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
PDLIM1O00151 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM1O00151 AC105020.6-201ENST00000621523 1217 ntBASIC17.97■□□□□ 0.47
PDLIM1O00151 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.97■□□□□ 0.47
PDLIM1O00151 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.97■□□□□ 0.47
PDLIM1O00151 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM1O00151 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM1O00151 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM1O00151 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.97■□□□□ 0.47
PDLIM1O00151 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.97■□□□□ 0.47
PDLIM1O00151 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.97■□□□□ 0.47
PDLIM1O00151 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
PDLIM1O00151 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM1O00151 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM1O00151 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.96■□□□□ 0.47
PDLIM1O00151 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PDLIM1O00151 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.96■□□□□ 0.47
PDLIM1O00151 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.96■□□□□ 0.47
PDLIM1O00151 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.96■□□□□ 0.47
PDLIM1O00151 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.96■□□□□ 0.47
PDLIM1O00151 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM1O00151 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM1O00151 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM1O00151 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.96■□□□□ 0.47
PDLIM1O00151 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PDLIM1O00151 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM1O00151 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PDLIM1O00151 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms