Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRRM3A6NNA2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SRRM3A6NNA2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRRM3A6NNA2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 AL512353.2-201ENST00000448759 1962 ntBASIC19.55■□□□□ 0.72
SRRM3A6NNA2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.55■□□□□ 0.72
SRRM3A6NNA2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 KRASP1-201ENST00000407852 552 ntBASIC19.54■□□□□ 0.72
SRRM3A6NNA2 AC113347.1-201ENST00000413321 391 ntBASIC19.54■□□□□ 0.72
SRRM3A6NNA2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SRRM3A6NNA2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 AC067852.2-201ENST00000590513 2313 ntBASIC19.53■□□□□ 0.72
SRRM3A6NNA2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SRRM3A6NNA2 TEX21P-204ENST00000641479 1693 ntBASIC19.52■□□□□ 0.72
SRRM3A6NNA2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 MCRIP2P1-201ENST00000394346 511 ntBASIC19.52■□□□□ 0.72
SRRM3A6NNA2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 AL355355.2-201ENST00000442321 338 ntBASIC19.52■□□□□ 0.72
SRRM3A6NNA2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SRRM3A6NNA2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms