Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 MIR939-201ENST00000401314 82 ntBASIC13.44□□□□□ -0.26
LINC01549A6NIU2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 AC027612.3-201ENST00000413684 1047 ntBASIC13.43□□□□□ -0.26
LINC01549A6NIU2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01549A6NIU2 AC104417.2-201ENST00000562989 1793 ntBASIC13.43□□□□□ -0.26
LINC01549A6NIU2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 KRT18P68-201ENST00000392293 1000 ntBASIC13.42□□□□□ -0.26
LINC01549A6NIU2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 AC106739.1-201ENST00000617035 715 ntBASIC13.42□□□□□ -0.26
LINC01549A6NIU2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 ESPNP-201ENST00000270691 2015 ntBASIC13.42□□□□□ -0.26
LINC01549A6NIU2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LINC01549A6NIU2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01549A6NIU2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.41□□□□□ -0.26
LINC01549A6NIU2 TFP1-202ENST00000475455 1573 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms