Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 AP005242.2-201ENST00000580065 1175 ntBASIC19.18■□□□□ 0.66
CAPN8A6NHC0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.18■□□□□ 0.66
CAPN8A6NHC0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 AC097488.1-201ENST00000507834 756 ntBASIC19.17■□□□□ 0.66
CAPN8A6NHC0 SLC25A1P4-201ENST00000567977 778 ntBASIC19.17■□□□□ 0.66
CAPN8A6NHC0 RN7SL850P-201ENST00000579959 291 ntBASIC19.17■□□□□ 0.66
CAPN8A6NHC0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.17■□□□□ 0.66
CAPN8A6NHC0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN8A6NHC0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 CKBP1-201ENST00000565489 1086 ntBASIC19.16■□□□□ 0.66
CAPN8A6NHC0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 AC007613.1-201ENST00000572811 2597 ntBASIC19.16■□□□□ 0.66
CAPN8A6NHC0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.16■□□□□ 0.66
CAPN8A6NHC0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.16■□□□□ 0.66
CAPN8A6NHC0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.16■□□□□ 0.66
CAPN8A6NHC0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms