Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV3S1A0A5B6 AL390719.1-204ENST00000412397 1219 ntBASIC17.71■□□□□ 0.43
TCRBV3S1A0A5B6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.71■□□□□ 0.43
TCRBV3S1A0A5B6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.71■□□□□ 0.43
TCRBV3S1A0A5B6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.71■□□□□ 0.43
TCRBV3S1A0A5B6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV3S1A0A5B6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV3S1A0A5B6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV3S1A0A5B6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV3S1A0A5B6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
TCRBV3S1A0A5B6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV3S1A0A5B6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV3S1A0A5B6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV3S1A0A5B6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.42
TCRBV3S1A0A5B6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.71■□□□□ 0.42
TCRBV3S1A0A5B6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 AL512625.2-201ENST00000417533 625 ntBASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 KRT18P16-201ENST00000510337 1294 ntBASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.7■□□□□ 0.42
TCRBV3S1A0A5B6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 AC012317.2-201ENST00000623305 2251 ntBASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 MTMR9LP-203ENST00000426597 1545 ntBASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.69■□□□□ 0.42
TCRBV3S1A0A5B6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 AL645608.8-201ENST00000606034 2086 ntBASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 AC093787.1-201ENST00000450396 207 ntBASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV3S1A0A5B6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.67■□□□□ 0.42
TCRBV3S1A0A5B6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms