Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 AL359736.2-201ENST00000621992 437 ntBASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 CR392000.1-201ENST00000624770 1228 ntBASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 RCC2P6-201ENST00000526625 1557 ntBASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV6-4A0A1B0GX49 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC091390.4-202ENST00000476426 537 ntBASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.34□□□□□ -0.27
TRBV6-4A0A1B0GX49 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
TRBV6-4A0A1B0GX49 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
TRBV6-4A0A1B0GX49 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 KRT8P3-201ENST00000519669 1449 ntBASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 AC011298.2-201ENST00000617989 482 ntBASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms