Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL391807.1-203ENST00000604392 2365 ntBASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC187A0A096LP49 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 KRT8P10-201ENST00000450021 1447 ntBASIC17.89■□□□□ 0.45
CCDC187A0A096LP49 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 AC099778.1-201ENST00000568593 1911 ntBASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 UNC93B7-201ENST00000509439 705 ntBASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 IFNL4P1-201ENST00000607083 540 ntBASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC187A0A096LP49 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC187A0A096LP49 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms