Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 C1QL1P1-201ENST00000568105 661 ntBASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV30A0A087WSZ9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 AL355802.2-201ENST00000402069 882 ntBASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 AC090192.1-201ENST00000517740 490 ntBASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 AP003097.1-201ENST00000530657 1135 ntBASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV30A0A087WSZ9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 AL031598.1-201ENST00000561511 1773 ntBASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV30A0A087WSZ9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms