Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 RNU6-1333P-201ENST00000516162 93 ntBASIC2.55□□□□□ -2
ITGB1P05556 AC127455.1-201ENST00000565496 145 ntBASIC2.55□□□□□ -2
ITGB1P05556 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
ITGB1P05556 MIR340-201ENST00000362125 95 ntBASIC2.54□□□□□ -2
ITGB1P05556 Y_RNA.127-201ENST00000363386 109 ntBASIC2.54□□□□□ -2
ITGB1P05556 RNU6-271P-201ENST00000363858 105 ntBASIC2.54□□□□□ -2
ITGB1P05556 RNA5SP205-201ENST00000364653 136 ntBASIC2.54□□□□□ -2
ITGB1P05556 SNORD20-201ENST00000384550 80 ntBASIC2.54□□□□□ -2
ITGB1P05556 MIR144-201ENST00000384886 86 ntBASIC2.54□□□□□ -2
ITGB1P05556 MIR561-201ENST00000385216 97 ntBASIC2.54□□□□□ -2
ITGB1P05556 MIR1278-201ENST00000408753 81 ntBASIC2.54□□□□□ -2
ITGB1P05556 AC123900.1-201ENST00000420390 96 ntBASIC2.54□□□□□ -2
ITGB1P05556 AC092991.1-201ENST00000477176 376 ntBASIC2.54□□□□□ -2
ITGB1P05556 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.54□□□□□ -2
ITGB1P05556 RNA5SP20-201ENST00000515976 84 ntBASIC2.54□□□□□ -2
ITGB1P05556 AC005972.2-201ENST00000604690 348 ntBASIC2.54□□□□□ -2
ITGB1P05556 AC006435.5-201ENST00000624486 112 ntBASIC2.54□□□□□ -2
ITGB1P05556 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
ITGB1P05556 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.54□□□□□ -2
ITGB1P05556 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
ITGB1P05556 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.53□□□□□ -2
ITGB1P05556 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
ITGB1P05556 RNU6-743P-201ENST00000364151 106 ntBASIC2.53□□□□□ -2
ITGB1P05556 RNU6-1323P-201ENST00000384025 107 ntBASIC2.53□□□□□ -2
ITGB1P05556 Y_RNA.521-201ENST00000384560 114 ntBASIC2.53□□□□□ -2
ITGB1P05556 RNU6-482P-201ENST00000391068 107 ntBASIC2.53□□□□□ -2
ITGB1P05556 RNU6-588P-201ENST00000410281 105 ntBASIC2.53□□□□□ -2
ITGB1P05556 Y_RNA.629-201ENST00000411368 105 ntBASIC2.53□□□□□ -2
ITGB1P05556 AL603825.1-201ENST00000438481 80 ntBASIC2.53□□□□□ -2
ITGB1P05556 RPL23AP54-201ENST00000495129 419 ntBASIC2.53□□□□□ -2
ITGB1P05556 RNU6-991P-201ENST00000516168 107 ntBASIC2.53□□□□□ -2
ITGB1P05556 MIR6844-201ENST00000637122 62 ntBASIC2.53□□□□□ -2
ITGB1P05556 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
ITGB1P05556 SNORD45.3-201ENST00000363836 72 ntBASIC2.52□□□□□ -2.01
ITGB1P05556 SNORD116-14-201ENST00000383894 92 ntBASIC2.52□□□□□ -2.01
ITGB1P05556 SNORD116-17-201ENST00000383929 92 ntBASIC2.52□□□□□ -2.01
ITGB1P05556 SNORD116-15-201ENST00000384445 92 ntBASIC2.52□□□□□ -2.01
ITGB1P05556 SNORD116-19-201ENST00000384729 92 ntBASIC2.52□□□□□ -2.01
ITGB1P05556 RNA5SP511-201ENST00000410487 115 ntBASIC2.52□□□□□ -2.01
ITGB1P05556 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.52□□□□□ -2.01
ITGB1P05556 RNU6-437P-201ENST00000459408 95 ntBASIC2.52□□□□□ -2.01
ITGB1P05556 RNU6-856P-201ENST00000516959 98 ntBASIC2.52□□□□□ -2.01
ITGB1P05556 RNU6-667P-201ENST00000517186 102 ntBASIC2.52□□□□□ -2.01
ITGB1P05556 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.52□□□□□ -2.01
ITGB1P05556 MIR203B-201ENST00000636080 86 ntBASIC2.52□□□□□ -2.01
ITGB1P05556 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ITGB1P05556 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
ITGB1P05556 AP006437.1-201ENST00000641440 3685 ntBASIC2.51□□□□□ -2.01
ITGB1P05556 RNA5SP99-201ENST00000364020 114 ntBASIC2.51□□□□□ -2.01
ITGB1P05556 SNORA25.6-201ENST00000364121 118 ntBASIC2.51□□□□□ -2.01
ITGB1P05556 RNU6-1240P-201ENST00000365155 104 ntBASIC2.51□□□□□ -2.01
ITGB1P05556 SNORA25B-201ENST00000365507 128 ntBASIC2.51□□□□□ -2.01
ITGB1P05556 DEFA7P-201ENST00000382676 285 ntBASIC2.51□□□□□ -2.01
ITGB1P05556 RNU6-136P-201ENST00000384663 107 ntBASIC2.51□□□□□ -2.01
ITGB1P05556 SNRPGP8-201ENST00000454064 226 ntBASIC2.51□□□□□ -2.01
ITGB1P05556 RPL36AP21-201ENST00000490372 323 ntBASIC2.51□□□□□ -2.01
ITGB1P05556 MIR6873-201ENST00000622788 63 ntBASIC2.51□□□□□ -2.01
ITGB1P05556 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.51□□□□□ -2.01
ITGB1P05556 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ITGB1P05556 RNU6-117P-201ENST00000365415 107 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 RNU6-1336P-201ENST00000383886 109 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 Y_RNA.393-201ENST00000383936 102 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 Y_RNA.587-201ENST00000391210 103 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 AL512604.1-201ENST00000404812 257 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 RNU4-43P-201ENST00000410628 137 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 AC018634.1-201ENST00000437554 401 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 RPS27P1-201ENST00000450552 247 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 RNU7-116P-201ENST00000516940 62 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 AC015720.1-201ENST00000565251 277 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 AL359881.1-201ENST00000602916 267 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 AC067747.1-201ENST00000608026 250 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 AC011603.4-201ENST00000611325 277 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 U4atac.1-201ENST00000618345 95 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ITGB1P05556 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ITGB1P05556 CENPCP1-201ENST00000533085 2578 ntBASIC2.5□□□□□ -2.01
ITGB1P05556 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ITGB1P05556 MIR21-201ENST00000362134 72 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 RNU4-41P-201ENST00000364426 143 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 RNU6-1082P-201ENST00000364574 107 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 Y_RNA.353-201ENST00000365440 108 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 MIR539-201ENST00000365690 78 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 RNY3P5-201ENST00000384127 102 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.49□□□□□ -2.01
ITGB1P05556 RPS27P22-201ENST00000478056 241 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 SNORA31.11-201ENST00000516528 139 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 Y_RNA.686-201ENST00000516548 134 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 RNU2-56P-201ENST00000516826 190 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 IGLV3-17-201ENST00000519099 244 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 NDUFA5P6-201ENST00000542110 379 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 MIR3646-201ENST00000578301 84 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 AC245884.12-201ENST00000615364 59 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 AL449363.1-201ENST00000617815 186 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 TUG1_4.1-201ENST00000619464 181 ntBASIC2.49□□□□□ -2.01
ITGB1P05556 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ITGB1P05556 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.48□□□□□ -2.01
ITGB1P05556 RNU4-13P-201ENST00000364019 141 ntBASIC2.48□□□□□ -2.01
ITGB1P05556 Y_RNA.251-201ENST00000364551 99 ntBASIC2.48□□□□□ -2.01
ITGB1P05556 RNU6-215P-201ENST00000365169 102 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 206.1 ms