RNA–Protein interactions for RNA: ENST00000410281.1

RNU6-588P-201, Transcript of RNA, U6 small nuclear 588, pseudogene, humanhuman

BASIC

Gene RNU6-588P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-588P-201ENST00000410281 AEBP2Q6ZN18 517 aaPredicted RBP14.25□□□□□ -0.13
RNU6-588P-201ENST00000410281 CHIC1Q5VXU3 224 aa13.43□□□□□ -0.26
RNU6-588P-201ENST00000410281 SENP3Q9H4L4 574 aaPredicted RBP12.29□□□□□ -0.44
RNU6-588P-201ENST00000410281 PHF23Q9BUL5 403 aaPredicted RBP12.07□□□□□ -0.48
RNU6-588P-201ENST00000410281 FOXD1Q16676 465 aa11.43□□□□□ -0.58
RNU6-588P-201ENST00000410281 POTEDQ86YR6 584 aa10.93□□□□□ -0.66
RNU6-588P-201ENST00000410281 MSH5O43196 834 aa10.86□□□□□ -0.67
RNU6-588P-201ENST00000410281 PIAS4Q8N2W9 510 aaPredicted RBP10.64□□□□□ -0.71
RNU6-588P-201ENST00000410281 PLPPR3Q6T4P5 718 aa10.62□□□□□ -0.71
RNU6-588P-201ENST00000410281 PPP6R1Q9UPN7 881 aa10.48□□□□□ -0.73
RNU6-588P-201ENST00000410281 ADRA2BP18089 450 aa10.44□□□□□ -0.74
RNU6-588P-201ENST00000410281 SCAF1Q9H7N4 1312 aaKnown RBP9.69□□□□□ -0.86
RNU6-588P-201ENST00000410281 DMRT2Q9Y5R5 561 aa9.69□□□□□ -0.86
RNU6-588P-201ENST00000410281 MAPK8IP2Q13387 824 aaPredicted RBP9.65□□□□□ -0.86
RNU6-588P-201ENST00000410281 CACNB1Q02641 598 aaPredicted RBP9.44□□□□□ -0.9
RNU6-588P-201ENST00000410281 DCAF8L1A6NGE4 600 aa9.29□□□□□ -0.92
RNU6-588P-201ENST00000410281 HOXD11P31277 338 aaPredicted RBP9.25□□□□□ -0.93
RNU6-588P-201ENST00000410281 PPP4R3CPQ6ZMV5 832 aa9.25□□□□□ -0.93
RNU6-588P-201ENST00000410281 RNF39Q9H2S5 420 aa9.2□□□□□ -0.94
RNU6-588P-201ENST00000410281 CNKSR2Q8WXI2 1034 aa9.16□□□□□ -0.94
RNU6-588P-201ENST00000410281 RNF216Q9NWF9 866 aaPredicted RBP9.13□□□□□ -0.95
RNU6-588P-201ENST00000410281 C1QBPQ07021 282 aaKnown RBP9.1□□□□□ -0.95
RNU6-588P-201ENST00000410281 DNAJC5BQ9UF47 199 aa9.05□□□□□ -0.96
RNU6-588P-201ENST00000410281 NCBP3Q53F19 620 aaKnown RBP8.89□□□□□ -0.99
RNU6-588P-201ENST00000410281 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.82□□□□□ -1
RNU6-588P-201ENST00000410281 NPM3O75607 178 aaKnown RBP8.67□□□□□ -1.02
RNU6-588P-201ENST00000410281 U3KPZ7 1027 aaPredicted RBP8.56□□□□□ -1.04
RNU6-588P-201ENST00000410281 CAPN15O75808 1086 aa8.54□□□□□ -1.04
RNU6-588P-201ENST00000410281 POTEHQ6S545 545 aa8.54□□□□□ -1.04
RNU6-588P-201ENST00000410281 DSG3P32926 999 aa8.53□□□□□ -1.04
RNU6-588P-201ENST00000410281 SPINK5Q9NQ38 1064 aaPredicted RBP8.49□□□□□ -1.05
RNU6-588P-201ENST00000410281 APLP2Q06481 763 aa8.43□□□□□ -1.06
RNU6-588P-201ENST00000410281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.35□□□□□ -1.07
RNU6-588P-201ENST00000410281 HNRNPUL2Q1KMD3 747 aaKnown RBP8.35□□□□□ -1.07
RNU6-588P-201ENST00000410281 ZNF219Q9P2Y4 722 aaPredicted RBP8.35□□□□□ -1.07
RNU6-588P-201ENST00000410281 TRHP20396 242 aaPredicted RBP8.33□□□□□ -1.08
RNU6-588P-201ENST00000410281 SLC4A2P04920 1241 aa8.32□□□□□ -1.08
RNU6-588P-201ENST00000410281 ABCB7O75027 752 aa8.27□□□□□ -1.09
RNU6-588P-201ENST00000410281 KCNA4P22459 653 aa8.27□□□□□ -1.09
RNU6-588P-201ENST00000410281 SAMD1Q6SPF0 538 aaPredicted RBP8.25□□□□□ -1.09
RNU6-588P-201ENST00000410281 RBM42Q9BTD8 480 aaKnown RBP8.21□□□□□ -1.1
RNU6-588P-201ENST00000410281 MYCNP04198 464 aaPredicted RBP8.07□□□□□ -1.12
RNU6-588P-201ENST00000410281 POLA2Q14181 598 aa8.07□□□□□ -1.12
RNU6-588P-201ENST00000410281 CHRDL2Q6WN34 429 aa8.07□□□□□ -1.12
RNU6-588P-201ENST00000410281 AKT1S1Q96B36 256 aa7.95□□□□□ -1.14
RNU6-588P-201ENST00000410281 ZBTB12Q9Y330 459 aaPredicted RBP7.95□□□□□ -1.14
RNU6-588P-201ENST00000410281 SP7Q8TDD2 431 aaPredicted RBP7.9□□□□□ -1.14
RNU6-588P-201ENST00000410281 REM2Q8IYK8 340 aaPredicted RBP7.85□□□□□ -1.15
RNU6-588P-201ENST00000410281 FOXD4L1Q9NU39 408 aa7.83□□□□□ -1.16
RNU6-588P-201ENST00000410281 ATF5Q9Y2D1 282 aaPredicted RBP7.82□□□□□ -1.16
RNU6-588P-201ENST00000410281 PIP4P2Q8N4L2 257 aa7.81□□□□□ -1.16
RNU6-588P-201ENST00000410281 SLC4A1APQ9BWU0 796 aaKnown RBP7.8□□□□□ -1.16
RNU6-588P-201ENST00000410281 HAX1O00165 279 aa7.77□□□□□ -1.17
RNU6-588P-201ENST00000410281 OSCARQ8IYS5 282 aa7.77□□□□□ -1.17
RNU6-588P-201ENST00000410281 FXR2P51116 673 aaKnown RBP eCLIP7.75□□□□□ -1.17
RNU6-588P-201ENST00000410281 PITPNM1O00562 1244 aa7.74□□□□□ -1.17
RNU6-588P-201ENST00000410281 ATXN8OSP0DMR3 200 aa7.67□□□□□ -1.18
RNU6-588P-201ENST00000410281 SPDYE2BA6NHP3 402 aa7.65□□□□□ -1.18
RNU6-588P-201ENST00000410281 SPDYE6P0CI01 402 aa7.65□□□□□ -1.18
RNU6-588P-201ENST00000410281 SPDYE2Q495Y8 402 aa7.65□□□□□ -1.18
RNU6-588P-201ENST00000410281 FBLN2P98095 1184 aa7.63□□□□□ -1.19
RNU6-588P-201ENST00000410281 EVX2Q03828 476 aa7.58□□□□□ -1.2
RNU6-588P-201ENST00000410281 SPDYE1Q8NFV5 336 aaPredicted RBP7.58□□□□□ -1.2
RNU6-588P-201ENST00000410281 PRKAR2AP13861 404 aaKnown RBP7.57□□□□□ -1.2
RNU6-588P-201ENST00000410281 ZBTB22O15209 634 aa7.56□□□□□ -1.2
RNU6-588P-201ENST00000410281 CLEC11AQ9Y240 323 aa7.55□□□□□ -1.2
RNU6-588P-201ENST00000410281 C19orf67A6NJJ6 358 aa7.51□□□□□ -1.21
RNU6-588P-201ENST00000410281 ZNF692Q9BU19 519 aaPredicted RBP7.51□□□□□ -1.21
RNU6-588P-201ENST00000410281 SSUH2Q9Y2M2 353 aa7.49□□□□□ -1.21
RNU6-588P-201ENST00000410281 GABBR2O75899 941 aa7.45□□□□□ -1.22
RNU6-588P-201ENST00000410281 MKRN4PQ13434 485 aaPredicted RBP7.45□□□□□ -1.22
RNU6-588P-201ENST00000410281 PRR29P0C7W0 189 aa7.42□□□□□ -1.22
RNU6-588P-201ENST00000410281 LHX8Q68G74 356 aa7.41□□□□□ -1.22
RNU6-588P-201ENST00000410281 CLCN6P51797 869 aa7.38□□□□□ -1.23
RNU6-588P-201ENST00000410281 CHADLQ6NUI6 762 aa7.38□□□□□ -1.23
RNU6-588P-201ENST00000410281 PABPN1Q86U42 306 aaKnown RBP eCLIP7.37□□□□□ -1.23
RNU6-588P-201ENST00000410281 CD44P16070 742 aaKnown RBP7.31□□□□□ -1.24
RNU6-588P-201ENST00000410281 FARP1Q9Y4F1 1045 aaPredicted RBP7.3□□□□□ -1.24
RNU6-588P-201ENST00000410281 POTEIP0CG38 1075 aa7.25□□□□□ -1.25
RNU6-588P-201ENST00000410281 DCBLD2Q96PD2 775 aa7.24□□□□□ -1.25
RNU6-588P-201ENST00000410281 ZNF579Q8NAF0 562 aaKnown RBP7.19□□□□□ -1.26
RNU6-588P-201ENST00000410281 STAG3Q9UJ98 1225 aa7.19□□□□□ -1.26
RNU6-588P-201ENST00000410281 ZRANB1Q9UGI0 708 aa7.17□□□□□ -1.26
RNU6-588P-201ENST00000410281 CREBZFQ9NS37 354 aa7.13□□□□□ -1.27
RNU6-588P-201ENST00000410281 PAK3O75914 559 aaPredicted RBP7.12□□□□□ -1.27
RNU6-588P-201ENST00000410281 PLSCR2Q9NRY7 297 aa7.11□□□□□ -1.27
RNU6-588P-201ENST00000410281 GALR2O43603 387 aaPredicted RBP7.08□□□□□ -1.28
RNU6-588P-201ENST00000410281 NPM1P06748 294 aaKnown RBP eCLIP7.07□□□□□ -1.28
RNU6-588P-201ENST00000410281 OTUD5Q96G74 571 aa7.05□□□□□ -1.28
RNU6-588P-201ENST00000410281 SPDYE4A6NLX3 237 aa7.04□□□□□ -1.28
RNU6-588P-201ENST00000410281 CSRNP3Q8WYN3 585 aa7.04□□□□□ -1.28
RNU6-588P-201ENST00000410281 POTEB2H3BUK9 544 aa7□□□□□ -1.29
RNU6-588P-201ENST00000410281 PHF12Q96QT6 1004 aa7□□□□□ -1.29
RNU6-588P-201ENST00000410281 POTEMA6NI47 508 aa6.98□□□□□ -1.29
RNU6-588P-201ENST00000410281 PCDH10Q9P2E7 1040 aa6.98□□□□□ -1.29
RNU6-588P-201ENST00000410281 C7P10643 843 aa6.97□□□□□ -1.29
RNU6-588P-201ENST00000410281 MNX1P50219 401 aaPredicted RBP6.97□□□□□ -1.29
RNU6-588P-201ENST00000410281 ASTLQ6HA08 431 aaPredicted RBP6.96□□□□□ -1.3
RNU6-588P-201ENST00000410281 SLC39A7Q92504 469 aa6.96□□□□□ -1.3
RNU6-588P-201ENST00000410281 POTEGQ6S5H5 508 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms