RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 AEBP2Q6ZN18 517 aaPredicted RBP14.98□□□□□ -0.01
RNU2-56P-201ENST00000516826 CHIC1Q5VXU3 224 aa14.06□□□□□ -0.16
RNU2-56P-201ENST00000516826 SENP3Q9H4L4 574 aaPredicted RBP12.9□□□□□ -0.34
RNU2-56P-201ENST00000516826 PHF23Q9BUL5 403 aaPredicted RBP12.65□□□□□ -0.38
RNU2-56P-201ENST00000516826 FOXD1Q16676 465 aa12.02□□□□□ -0.49
RNU2-56P-201ENST00000516826 POTEDQ86YR6 584 aa11.66□□□□□ -0.54
RNU2-56P-201ENST00000516826 MSH5O43196 834 aa11.43□□□□□ -0.58
RNU2-56P-201ENST00000516826 PIAS4Q8N2W9 510 aaPredicted RBP11.12□□□□□ -0.63
RNU2-56P-201ENST00000516826 PLPPR3Q6T4P5 718 aa11.02□□□□□ -0.65
RNU2-56P-201ENST00000516826 PPP6R1Q9UPN7 881 aa10.97□□□□□ -0.65
RNU2-56P-201ENST00000516826 ADRA2BP18089 450 aa10.89□□□□□ -0.67
RNU2-56P-201ENST00000516826 DMRT2Q9Y5R5 561 aa10.17□□□□□ -0.78
RNU2-56P-201ENST00000516826 MAPK8IP2Q13387 824 aaPredicted RBP10.09□□□□□ -0.79
RNU2-56P-201ENST00000516826 SCAF1Q9H7N4 1312 aaKnown RBP10.07□□□□□ -0.8
RNU2-56P-201ENST00000516826 CACNB1Q02641 598 aaPredicted RBP9.95□□□□□ -0.82
RNU2-56P-201ENST00000516826 RNF39Q9H2S5 420 aa9.71□□□□□ -0.86
RNU2-56P-201ENST00000516826 HOXD11P31277 338 aaPredicted RBP9.69□□□□□ -0.86
RNU2-56P-201ENST00000516826 DCAF8L1A6NGE4 600 aa9.67□□□□□ -0.86
RNU2-56P-201ENST00000516826 C1QBPQ07021 282 aaKnown RBP9.58□□□□□ -0.88
RNU2-56P-201ENST00000516826 PPP4R3CPQ6ZMV5 832 aa9.58□□□□□ -0.88
RNU2-56P-201ENST00000516826 CNKSR2Q8WXI2 1034 aa9.52□□□□□ -0.89
RNU2-56P-201ENST00000516826 RNF216Q9NWF9 866 aaPredicted RBP9.52□□□□□ -0.89
RNU2-56P-201ENST00000516826 DNAJC5BQ9UF47 199 aa9.52□□□□□ -0.89
RNU2-56P-201ENST00000516826 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.17□□□□□ -0.94
RNU2-56P-201ENST00000516826 NCBP3Q53F19 620 aaKnown RBP9.16□□□□□ -0.94
RNU2-56P-201ENST00000516826 POTEHQ6S545 545 aa9.08□□□□□ -0.96
RNU2-56P-201ENST00000516826 NPM3O75607 178 aaKnown RBP8.97□□□□□ -0.97
RNU2-56P-201ENST00000516826 DSG3P32926 999 aa8.96□□□□□ -0.98
RNU2-56P-201ENST00000516826 U3KPZ7 1027 aaPredicted RBP8.94□□□□□ -0.98
RNU2-56P-201ENST00000516826 CAPN15O75808 1086 aa8.89□□□□□ -0.99
RNU2-56P-201ENST00000516826 SPINK5Q9NQ38 1064 aaPredicted RBP8.88□□□□□ -0.99
RNU2-56P-201ENST00000516826 APLP2Q06481 763 aa8.75□□□□□ -1.01
RNU2-56P-201ENST00000516826 ZNF219Q9P2Y4 722 aaPredicted RBP8.71□□□□□ -1.02
RNU2-56P-201ENST00000516826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.66□□□□□ -1.02
RNU2-56P-201ENST00000516826 SLC4A2P04920 1241 aa8.66□□□□□ -1.02
RNU2-56P-201ENST00000516826 HNRNPUL2Q1KMD3 747 aaKnown RBP8.66□□□□□ -1.02
RNU2-56P-201ENST00000516826 TRHP20396 242 aaPredicted RBP8.65□□□□□ -1.02
RNU2-56P-201ENST00000516826 ABCB7O75027 752 aa8.61□□□□□ -1.03
RNU2-56P-201ENST00000516826 RBM42Q9BTD8 480 aaKnown RBP8.59□□□□□ -1.03
RNU2-56P-201ENST00000516826 SAMD1Q6SPF0 538 aaPredicted RBP8.57□□□□□ -1.04
RNU2-56P-201ENST00000516826 CHRDL2Q6WN34 429 aa8.5□□□□□ -1.05
RNU2-56P-201ENST00000516826 KCNA4P22459 653 aa8.48□□□□□ -1.05
RNU2-56P-201ENST00000516826 POLA2Q14181 598 aa8.38□□□□□ -1.07
RNU2-56P-201ENST00000516826 SP7Q8TDD2 431 aaPredicted RBP8.37□□□□□ -1.07
RNU2-56P-201ENST00000516826 MYCNP04198 464 aaPredicted RBP8.34□□□□□ -1.07
RNU2-56P-201ENST00000516826 AKT1S1Q96B36 256 aa8.33□□□□□ -1.08
RNU2-56P-201ENST00000516826 ZBTB12Q9Y330 459 aaPredicted RBP8.26□□□□□ -1.09
RNU2-56P-201ENST00000516826 PIP4P2Q8N4L2 257 aa8.22□□□□□ -1.09
RNU2-56P-201ENST00000516826 REM2Q8IYK8 340 aaPredicted RBP8.21□□□□□ -1.1
RNU2-56P-201ENST00000516826 FXR2P51116 673 aaKnown RBP eCLIP8.15□□□□□ -1.1
RNU2-56P-201ENST00000516826 HAX1O00165 279 aa8.14□□□□□ -1.11
RNU2-56P-201ENST00000516826 ATF5Q9Y2D1 282 aaPredicted RBP8.11□□□□□ -1.11
RNU2-56P-201ENST00000516826 PITPNM1O00562 1244 aa8.1□□□□□ -1.11
RNU2-56P-201ENST00000516826 OSCARQ8IYS5 282 aa8.08□□□□□ -1.12
RNU2-56P-201ENST00000516826 FOXD4L1Q9NU39 408 aa8.06□□□□□ -1.12
RNU2-56P-201ENST00000516826 EVX2Q03828 476 aa8□□□□□ -1.13
RNU2-56P-201ENST00000516826 SPDYE2BA6NHP3 402 aa7.96□□□□□ -1.14
RNU2-56P-201ENST00000516826 SPDYE6P0CI01 402 aa7.96□□□□□ -1.14
RNU2-56P-201ENST00000516826 SPDYE2Q495Y8 402 aa7.96□□□□□ -1.14
RNU2-56P-201ENST00000516826 SLC4A1APQ9BWU0 796 aaKnown RBP7.96□□□□□ -1.14
RNU2-56P-201ENST00000516826 ATXN8OSP0DMR3 200 aa7.93□□□□□ -1.14
RNU2-56P-201ENST00000516826 C19orf67A6NJJ6 358 aa7.9□□□□□ -1.14
RNU2-56P-201ENST00000516826 PRKAR2AP13861 404 aaKnown RBP7.89□□□□□ -1.15
RNU2-56P-201ENST00000516826 SPDYE1Q8NFV5 336 aaPredicted RBP7.89□□□□□ -1.15
RNU2-56P-201ENST00000516826 FBLN2P98095 1184 aa7.87□□□□□ -1.15
RNU2-56P-201ENST00000516826 GABBR2O75899 941 aa7.84□□□□□ -1.15
RNU2-56P-201ENST00000516826 LHX8Q68G74 356 aa7.84□□□□□ -1.15
RNU2-56P-201ENST00000516826 CLEC11AQ9Y240 323 aa7.81□□□□□ -1.16
RNU2-56P-201ENST00000516826 SSUH2Q9Y2M2 353 aa7.8□□□□□ -1.16
RNU2-56P-201ENST00000516826 ZBTB22O15209 634 aa7.77□□□□□ -1.17
RNU2-56P-201ENST00000516826 ZNF692Q9BU19 519 aaPredicted RBP7.77□□□□□ -1.17
RNU2-56P-201ENST00000516826 CLCN6P51797 869 aa7.74□□□□□ -1.17
RNU2-56P-201ENST00000516826 MKRN4PQ13434 485 aaPredicted RBP7.74□□□□□ -1.17
RNU2-56P-201ENST00000516826 PRR29P0C7W0 189 aa7.69□□□□□ -1.18
RNU2-56P-201ENST00000516826 CHADLQ6NUI6 762 aa7.69□□□□□ -1.18
RNU2-56P-201ENST00000516826 POTEIP0CG38 1075 aa7.65□□□□□ -1.18
RNU2-56P-201ENST00000516826 CD44P16070 742 aaKnown RBP7.62□□□□□ -1.19
RNU2-56P-201ENST00000516826 PABPN1Q86U42 306 aaKnown RBP eCLIP7.62□□□□□ -1.19
RNU2-56P-201ENST00000516826 FARP1Q9Y4F1 1045 aaPredicted RBP7.61□□□□□ -1.19
RNU2-56P-201ENST00000516826 DCBLD2Q96PD2 775 aa7.55□□□□□ -1.2
RNU2-56P-201ENST00000516826 ZNF579Q8NAF0 562 aaKnown RBP7.53□□□□□ -1.2
RNU2-56P-201ENST00000516826 PLSCR2Q9NRY7 297 aa7.53□□□□□ -1.2
RNU2-56P-201ENST00000516826 ZRANB1Q9UGI0 708 aa7.46□□□□□ -1.22
RNU2-56P-201ENST00000516826 OTUD5Q96G74 571 aa7.45□□□□□ -1.22
RNU2-56P-201ENST00000516826 STAG3Q9UJ98 1225 aa7.43□□□□□ -1.22
RNU2-56P-201ENST00000516826 CREBZFQ9NS37 354 aa7.42□□□□□ -1.22
RNU2-56P-201ENST00000516826 GALR2O43603 387 aaPredicted RBP7.4□□□□□ -1.22
RNU2-56P-201ENST00000516826 PCDH10Q9P2E7 1040 aa7.4□□□□□ -1.22
RNU2-56P-201ENST00000516826 POTEB2H3BUK9 544 aa7.38□□□□□ -1.23
RNU2-56P-201ENST00000516826 POTEMA6NI47 508 aa7.37□□□□□ -1.23
RNU2-56P-201ENST00000516826 PAK3O75914 559 aaPredicted RBP7.36□□□□□ -1.23
RNU2-56P-201ENST00000516826 POTEGQ6S5H5 508 aa7.34□□□□□ -1.23
RNU2-56P-201ENST00000516826 NPM1P06748 294 aaKnown RBP eCLIP7.31□□□□□ -1.24
RNU2-56P-201ENST00000516826 PELP1Q8IZL8 1130 aaKnown RBP7.3□□□□□ -1.24
RNU2-56P-201ENST00000516826 C7P10643 843 aa7.29□□□□□ -1.24
RNU2-56P-201ENST00000516826 ASTLQ6HA08 431 aaPredicted RBP7.29□□□□□ -1.24
RNU2-56P-201ENST00000516826 PHF12Q96QT6 1004 aa7.29□□□□□ -1.24
RNU2-56P-201ENST00000516826 MAMSTRQ6ZN01 415 aa7.28□□□□□ -1.24
RNU2-56P-201ENST00000516826 MNX1P50219 401 aaPredicted RBP7.27□□□□□ -1.25
RNU2-56P-201ENST00000516826 SLC39A7Q92504 469 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms