RNA–Protein interactions for RNA: ENST00000516162.1

RNU6-1333P-201, Transcript of RNA, U6 small nuclear 1333, pseudogene, humanhuman

BASIC

Gene RNU6-1333P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1333P-201ENST00000516162 AEBP2Q6ZN18 517 aaPredicted RBP16.94■□□□□ 0.3
RNU6-1333P-201ENST00000516162 CHIC1Q5VXU3 224 aa15.87■□□□□ 0.13
RNU6-1333P-201ENST00000516162 SENP3Q9H4L4 574 aaPredicted RBP14.6□□□□□ -0.07
RNU6-1333P-201ENST00000516162 PHF23Q9BUL5 403 aaPredicted RBP14.28□□□□□ -0.12
RNU6-1333P-201ENST00000516162 POTEDQ86YR6 584 aa13.65□□□□□ -0.22
RNU6-1333P-201ENST00000516162 FOXD1Q16676 465 aa13.63□□□□□ -0.23
RNU6-1333P-201ENST00000516162 MSH5O43196 834 aa13.03□□□□□ -0.32
RNU6-1333P-201ENST00000516162 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
RNU6-1333P-201ENST00000516162 PPP6R1Q9UPN7 881 aa12.28□□□□□ -0.44
RNU6-1333P-201ENST00000516162 ADRA2BP18089 450 aa12.21□□□□□ -0.45
RNU6-1333P-201ENST00000516162 PLPPR3Q6T4P5 718 aa12.19□□□□□ -0.46
RNU6-1333P-201ENST00000516162 CACNB1Q02641 598 aaPredicted RBP11.5□□□□□ -0.57
RNU6-1333P-201ENST00000516162 DMRT2Q9Y5R5 561 aa11.47□□□□□ -0.57
RNU6-1333P-201ENST00000516162 MAPK8IP2Q13387 824 aaPredicted RBP11.37□□□□□ -0.59
RNU6-1333P-201ENST00000516162 SCAF1Q9H7N4 1312 aaKnown RBP11.23□□□□□ -0.61
RNU6-1333P-201ENST00000516162 RNF39Q9H2S5 420 aa11.04□□□□□ -0.64
RNU6-1333P-201ENST00000516162 DCAF8L1A6NGE4 600 aa11□□□□□ -0.65
RNU6-1333P-201ENST00000516162 C1QBPQ07021 282 aaKnown RBP10.86□□□□□ -0.67
RNU6-1333P-201ENST00000516162 HOXD11P31277 338 aaPredicted RBP10.82□□□□□ -0.68
RNU6-1333P-201ENST00000516162 DNAJC5BQ9UF47 199 aa10.61□□□□□ -0.71
RNU6-1333P-201ENST00000516162 POTEHQ6S545 545 aa10.59□□□□□ -0.71
RNU6-1333P-201ENST00000516162 RNF216Q9NWF9 866 aaPredicted RBP10.59□□□□□ -0.71
RNU6-1333P-201ENST00000516162 PPP4R3CPQ6ZMV5 832 aa10.58□□□□□ -0.72
RNU6-1333P-201ENST00000516162 CNKSR2Q8WXI2 1034 aa10.54□□□□□ -0.72
RNU6-1333P-201ENST00000516162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.3□□□□□ -0.76
RNU6-1333P-201ENST00000516162 DSG3P32926 999 aa10.13□□□□□ -0.79
RNU6-1333P-201ENST00000516162 CAPN15O75808 1086 aa10.05□□□□□ -0.8
RNU6-1333P-201ENST00000516162 NCBP3Q53F19 620 aaKnown RBP10.03□□□□□ -0.8
RNU6-1333P-201ENST00000516162 SPINK5Q9NQ38 1064 aaPredicted RBP10.03□□□□□ -0.8
RNU6-1333P-201ENST00000516162 U3KPZ7 1027 aaPredicted RBP10.02□□□□□ -0.81
RNU6-1333P-201ENST00000516162 NPM3O75607 178 aaKnown RBP9.86□□□□□ -0.83
RNU6-1333P-201ENST00000516162 ABCB7O75027 752 aa9.75□□□□□ -0.85
RNU6-1333P-201ENST00000516162 ZNF219Q9P2Y4 722 aaPredicted RBP9.75□□□□□ -0.85
RNU6-1333P-201ENST00000516162 TRHP20396 242 aaPredicted RBP9.74□□□□□ -0.85
RNU6-1333P-201ENST00000516162 APLP2Q06481 763 aa9.74□□□□□ -0.85
RNU6-1333P-201ENST00000516162 RBM42Q9BTD8 480 aaKnown RBP9.73□□□□□ -0.85
RNU6-1333P-201ENST00000516162 CHRDL2Q6WN34 429 aa9.71□□□□□ -0.86
RNU6-1333P-201ENST00000516162 SP7Q8TDD2 431 aaPredicted RBP9.67□□□□□ -0.86
RNU6-1333P-201ENST00000516162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.58□□□□□ -0.88
RNU6-1333P-201ENST00000516162 HNRNPUL2Q1KMD3 747 aaKnown RBP9.58□□□□□ -0.88
RNU6-1333P-201ENST00000516162 SLC4A2P04920 1241 aa9.55□□□□□ -0.88
RNU6-1333P-201ENST00000516162 SAMD1Q6SPF0 538 aaPredicted RBP9.48□□□□□ -0.89
RNU6-1333P-201ENST00000516162 AKT1S1Q96B36 256 aa9.37□□□□□ -0.91
RNU6-1333P-201ENST00000516162 POLA2Q14181 598 aa9.35□□□□□ -0.91
RNU6-1333P-201ENST00000516162 PIP4P2Q8N4L2 257 aa9.34□□□□□ -0.91
RNU6-1333P-201ENST00000516162 HAX1O00165 279 aa9.33□□□□□ -0.92
RNU6-1333P-201ENST00000516162 REM2Q8IYK8 340 aaPredicted RBP9.25□□□□□ -0.93
RNU6-1333P-201ENST00000516162 FXR2P51116 673 aaKnown RBP eCLIP9.21□□□□□ -0.94
RNU6-1333P-201ENST00000516162 ZBTB12Q9Y330 459 aaPredicted RBP9.18□□□□□ -0.94
RNU6-1333P-201ENST00000516162 PITPNM1O00562 1244 aa9.17□□□□□ -0.94
RNU6-1333P-201ENST00000516162 MYCNP04198 464 aaPredicted RBP9.16□□□□□ -0.94
RNU6-1333P-201ENST00000516162 KCNA4P22459 653 aa9.14□□□□□ -0.95
RNU6-1333P-201ENST00000516162 EVX2Q03828 476 aa9.13□□□□□ -0.95
RNU6-1333P-201ENST00000516162 OSCARQ8IYS5 282 aa9.09□□□□□ -0.95
RNU6-1333P-201ENST00000516162 LHX8Q68G74 356 aa9.04□□□□□ -0.96
RNU6-1333P-201ENST00000516162 PLSCR2Q9NRY7 297 aa8.98□□□□□ -0.97
RNU6-1333P-201ENST00000516162 C19orf67A6NJJ6 358 aa8.94□□□□□ -0.98
RNU6-1333P-201ENST00000516162 ATF5Q9Y2D1 282 aaPredicted RBP8.94□□□□□ -0.98
RNU6-1333P-201ENST00000516162 GABBR2O75899 941 aa8.93□□□□□ -0.98
RNU6-1333P-201ENST00000516162 PRKAR2AP13861 404 aaKnown RBP8.92□□□□□ -0.98
RNU6-1333P-201ENST00000516162 SPDYE2BA6NHP3 402 aa8.83□□□□□ -1
RNU6-1333P-201ENST00000516162 SPDYE6P0CI01 402 aa8.83□□□□□ -1
RNU6-1333P-201ENST00000516162 SPDYE2Q495Y8 402 aa8.83□□□□□ -1
RNU6-1333P-201ENST00000516162 SPDYE1Q8NFV5 336 aaPredicted RBP8.81□□□□□ -1
RNU6-1333P-201ENST00000516162 CLEC11AQ9Y240 323 aa8.79□□□□□ -1
RNU6-1333P-201ENST00000516162 FOXD4L1Q9NU39 408 aa8.74□□□□□ -1.01
RNU6-1333P-201ENST00000516162 POTEIP0CG38 1075 aa8.72□□□□□ -1.01
RNU6-1333P-201ENST00000516162 FBLN2P98095 1184 aa8.68□□□□□ -1.02
RNU6-1333P-201ENST00000516162 CHADLQ6NUI6 762 aa8.67□□□□□ -1.02
RNU6-1333P-201ENST00000516162 CLCN6P51797 869 aa8.66□□□□□ -1.02
RNU6-1333P-201ENST00000516162 SSUH2Q9Y2M2 353 aa8.64□□□□□ -1.03
RNU6-1333P-201ENST00000516162 CD44P16070 742 aaKnown RBP8.61□□□□□ -1.03
RNU6-1333P-201ENST00000516162 ZNF692Q9BU19 519 aaPredicted RBP8.6□□□□□ -1.03
RNU6-1333P-201ENST00000516162 DCBLD2Q96PD2 775 aa8.58□□□□□ -1.04
RNU6-1333P-201ENST00000516162 PRR29P0C7W0 189 aa8.57□□□□□ -1.04
RNU6-1333P-201ENST00000516162 POTEMA6NI47 508 aa8.55□□□□□ -1.04
RNU6-1333P-201ENST00000516162 ATXN8OSP0DMR3 200 aa8.55□□□□□ -1.04
RNU6-1333P-201ENST00000516162 SLC4A1APQ9BWU0 796 aaKnown RBP8.53□□□□□ -1.04
RNU6-1333P-201ENST00000516162 MKRN4PQ13434 485 aaPredicted RBP8.52□□□□□ -1.05
RNU6-1333P-201ENST00000516162 OTUD5Q96G74 571 aa8.52□□□□□ -1.05
RNU6-1333P-201ENST00000516162 FARP1Q9Y4F1 1045 aaPredicted RBP8.51□□□□□ -1.05
RNU6-1333P-201ENST00000516162 POTEGQ6S5H5 508 aa8.5□□□□□ -1.05
RNU6-1333P-201ENST00000516162 PCDH10Q9P2E7 1040 aa8.48□□□□□ -1.05
RNU6-1333P-201ENST00000516162 ZNF579Q8NAF0 562 aaKnown RBP8.47□□□□□ -1.05
RNU6-1333P-201ENST00000516162 PABPN1Q86U42 306 aaKnown RBP eCLIP8.45□□□□□ -1.06
RNU6-1333P-201ENST00000516162 POTEB2H3BUK9 544 aa8.42□□□□□ -1.06
RNU6-1333P-201ENST00000516162 ZBTB22O15209 634 aa8.39□□□□□ -1.07
RNU6-1333P-201ENST00000516162 ZRANB1Q9UGI0 708 aa8.38□□□□□ -1.07
RNU6-1333P-201ENST00000516162 GALR2O43603 387 aaPredicted RBP8.37□□□□□ -1.07
RNU6-1333P-201ENST00000516162 PELP1Q8IZL8 1130 aaKnown RBP8.25□□□□□ -1.09
RNU6-1333P-201ENST00000516162 LCE2DQ5TA82 110 aaPredicted RBP8.24□□□□□ -1.09
RNU6-1333P-201ENST00000516162 MAMSTRQ6ZN01 415 aa8.24□□□□□ -1.09
RNU6-1333P-201ENST00000516162 PAK3O75914 559 aaPredicted RBP8.23□□□□□ -1.09
RNU6-1333P-201ENST00000516162 CREBZFQ9NS37 354 aa8.22□□□□□ -1.09
RNU6-1333P-201ENST00000516162 METRNQ9UJH8 293 aa8.22□□□□□ -1.09
RNU6-1333P-201ENST00000516162 PHF12Q96QT6 1004 aa8.21□□□□□ -1.1
RNU6-1333P-201ENST00000516162 POTEJP0CG39 1038 aa8.2□□□□□ -1.1
RNU6-1333P-201ENST00000516162 C7P10643 843 aa8.2□□□□□ -1.1
RNU6-1333P-201ENST00000516162 SLC39A7Q92504 469 aa8.2□□□□□ -1.1
RNU6-1333P-201ENST00000516162 FAM163AQ96GL9 167 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms