RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 AEBP2Q6ZN18 517 aaPredicted RBP13.6□□□□□ -0.23
RNU4-43P-201ENST00000410628 CHIC1Q5VXU3 224 aa12.75□□□□□ -0.37
RNU4-43P-201ENST00000410628 POTEDQ86YR6 584 aa11.99□□□□□ -0.49
RNU4-43P-201ENST00000410628 SENP3Q9H4L4 574 aaPredicted RBP11.78□□□□□ -0.52
RNU4-43P-201ENST00000410628 PHF23Q9BUL5 403 aaPredicted RBP11.45□□□□□ -0.58
RNU4-43P-201ENST00000410628 FOXD1Q16676 465 aa11.01□□□□□ -0.65
RNU4-43P-201ENST00000410628 MSH5O43196 834 aa10.76□□□□□ -0.69
RNU4-43P-201ENST00000410628 PIAS4Q8N2W9 510 aaPredicted RBP10.17□□□□□ -0.78
RNU4-43P-201ENST00000410628 PLPPR3Q6T4P5 718 aa10.1□□□□□ -0.79
RNU4-43P-201ENST00000410628 PPP6R1Q9UPN7 881 aa10.09□□□□□ -0.79
RNU4-43P-201ENST00000410628 ADRA2BP18089 450 aa10.06□□□□□ -0.8
RNU4-43P-201ENST00000410628 CACNB1Q02641 598 aaPredicted RBP9.85□□□□□ -0.83
RNU4-43P-201ENST00000410628 MAPK8IP2Q13387 824 aaPredicted RBP9.3□□□□□ -0.92
RNU4-43P-201ENST00000410628 POTEHQ6S545 545 aa9.26□□□□□ -0.93
RNU4-43P-201ENST00000410628 DMRT2Q9Y5R5 561 aa9.14□□□□□ -0.95
RNU4-43P-201ENST00000410628 RNF39Q9H2S5 420 aa9.02□□□□□ -0.97
RNU4-43P-201ENST00000410628 SCAF1Q9H7N4 1312 aaKnown RBP9.02□□□□□ -0.97
RNU4-43P-201ENST00000410628 DCAF8L1A6NGE4 600 aa9.01□□□□□ -0.97
RNU4-43P-201ENST00000410628 PPP4R3CPQ6ZMV5 832 aa8.9□□□□□ -0.98
RNU4-43P-201ENST00000410628 C1QBPQ07021 282 aaKnown RBP8.88□□□□□ -0.99
RNU4-43P-201ENST00000410628 HOXD11P31277 338 aaPredicted RBP8.72□□□□□ -1.01
RNU4-43P-201ENST00000410628 CNKSR2Q8WXI2 1034 aa8.7□□□□□ -1.02
RNU4-43P-201ENST00000410628 RNF216Q9NWF9 866 aaPredicted RBP8.63□□□□□ -1.03
RNU4-43P-201ENST00000410628 NCBP3Q53F19 620 aaKnown RBP8.44□□□□□ -1.06
RNU4-43P-201ENST00000410628 NPM3O75607 178 aaKnown RBP8.43□□□□□ -1.06
RNU4-43P-201ENST00000410628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.37□□□□□ -1.07
RNU4-43P-201ENST00000410628 DNAJC5BQ9UF47 199 aa8.3□□□□□ -1.08
RNU4-43P-201ENST00000410628 SP7Q8TDD2 431 aaPredicted RBP8.25□□□□□ -1.09
RNU4-43P-201ENST00000410628 KCNA4P22459 653 aa8.23□□□□□ -1.09
RNU4-43P-201ENST00000410628 U3KPZ7 1027 aaPredicted RBP8.2□□□□□ -1.1
RNU4-43P-201ENST00000410628 SPINK5Q9NQ38 1064 aaPredicted RBP8.16□□□□□ -1.1
RNU4-43P-201ENST00000410628 PLSCR2Q9NRY7 297 aa8.16□□□□□ -1.1
RNU4-43P-201ENST00000410628 DSG3P32926 999 aa8.14□□□□□ -1.11
RNU4-43P-201ENST00000410628 CAPN15O75808 1086 aa8.11□□□□□ -1.11
RNU4-43P-201ENST00000410628 SLC4A2P04920 1241 aa8.09□□□□□ -1.11
RNU4-43P-201ENST00000410628 CHRDL2Q6WN34 429 aa8.05□□□□□ -1.12
RNU4-43P-201ENST00000410628 ABCB7O75027 752 aa7.98□□□□□ -1.13
RNU4-43P-201ENST00000410628 TRHP20396 242 aaPredicted RBP7.98□□□□□ -1.13
RNU4-43P-201ENST00000410628 RBM42Q9BTD8 480 aaKnown RBP7.9□□□□□ -1.14
RNU4-43P-201ENST00000410628 HAX1O00165 279 aa7.85□□□□□ -1.15
RNU4-43P-201ENST00000410628 ZNF219Q9P2Y4 722 aaPredicted RBP7.84□□□□□ -1.15
RNU4-43P-201ENST00000410628 APLP2Q06481 763 aa7.79□□□□□ -1.16
RNU4-43P-201ENST00000410628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.78□□□□□ -1.16
RNU4-43P-201ENST00000410628 HNRNPUL2Q1KMD3 747 aaKnown RBP7.78□□□□□ -1.16
RNU4-43P-201ENST00000410628 SAMD1Q6SPF0 538 aaPredicted RBP7.78□□□□□ -1.16
RNU4-43P-201ENST00000410628 LHX8Q68G74 356 aa7.75□□□□□ -1.17
RNU4-43P-201ENST00000410628 MYCNP04198 464 aaPredicted RBP7.73□□□□□ -1.17
RNU4-43P-201ENST00000410628 POLA2Q14181 598 aa7.72□□□□□ -1.17
RNU4-43P-201ENST00000410628 ATF5Q9Y2D1 282 aaPredicted RBP7.71□□□□□ -1.18
RNU4-43P-201ENST00000410628 SLC4A1APQ9BWU0 796 aaKnown RBP7.7□□□□□ -1.18
RNU4-43P-201ENST00000410628 PIP4P2Q8N4L2 257 aa7.62□□□□□ -1.19
RNU4-43P-201ENST00000410628 FOXD4L1Q9NU39 408 aa7.62□□□□□ -1.19
RNU4-43P-201ENST00000410628 ZBTB22O15209 634 aa7.6□□□□□ -1.19
RNU4-43P-201ENST00000410628 EVX2Q03828 476 aa7.5□□□□□ -1.21
RNU4-43P-201ENST00000410628 OSCARQ8IYS5 282 aa7.5□□□□□ -1.21
RNU4-43P-201ENST00000410628 AKT1S1Q96B36 256 aa7.47□□□□□ -1.21
RNU4-43P-201ENST00000410628 REM2Q8IYK8 340 aaPredicted RBP7.42□□□□□ -1.22
RNU4-43P-201ENST00000410628 ZBTB12Q9Y330 459 aaPredicted RBP7.41□□□□□ -1.22
RNU4-43P-201ENST00000410628 FXR2P51116 673 aaKnown RBP eCLIP7.39□□□□□ -1.23
RNU4-43P-201ENST00000410628 PITPNM1O00562 1244 aa7.37□□□□□ -1.23
RNU4-43P-201ENST00000410628 POTEMA6NI47 508 aa7.36□□□□□ -1.23
RNU4-43P-201ENST00000410628 GABBR2O75899 941 aa7.35□□□□□ -1.23
RNU4-43P-201ENST00000410628 ATXN8OSP0DMR3 200 aa7.31□□□□□ -1.24
RNU4-43P-201ENST00000410628 MKRN4PQ13434 485 aaPredicted RBP7.3□□□□□ -1.24
RNU4-43P-201ENST00000410628 POTEGQ6S5H5 508 aa7.3□□□□□ -1.24
RNU4-43P-201ENST00000410628 PCDH10Q9P2E7 1040 aa7.29□□□□□ -1.24
RNU4-43P-201ENST00000410628 FBLN2P98095 1184 aa7.26□□□□□ -1.25
RNU4-43P-201ENST00000410628 CLEC11AQ9Y240 323 aa7.23□□□□□ -1.25
RNU4-43P-201ENST00000410628 SPDYE2BA6NHP3 402 aa7.22□□□□□ -1.25
RNU4-43P-201ENST00000410628 SPDYE6P0CI01 402 aa7.22□□□□□ -1.25
RNU4-43P-201ENST00000410628 SPDYE2Q495Y8 402 aa7.22□□□□□ -1.25
RNU4-43P-201ENST00000410628 C19orf67A6NJJ6 358 aa7.2□□□□□ -1.26
RNU4-43P-201ENST00000410628 ZNF692Q9BU19 519 aaPredicted RBP7.19□□□□□ -1.26
RNU4-43P-201ENST00000410628 PRKAR2AP13861 404 aaKnown RBP7.17□□□□□ -1.26
RNU4-43P-201ENST00000410628 CHADLQ6NUI6 762 aa7.15□□□□□ -1.26
RNU4-43P-201ENST00000410628 SSUH2Q9Y2M2 353 aa7.15□□□□□ -1.26
RNU4-43P-201ENST00000410628 SPDYE1Q8NFV5 336 aaPredicted RBP7.13□□□□□ -1.27
RNU4-43P-201ENST00000410628 CSRNP3Q8WYN3 585 aa7.13□□□□□ -1.27
RNU4-43P-201ENST00000410628 POTEIP0CG38 1075 aa7.1□□□□□ -1.27
RNU4-43P-201ENST00000410628 PABPN1Q86U42 306 aaKnown RBP eCLIP7.1□□□□□ -1.27
RNU4-43P-201ENST00000410628 DCBLD2Q96PD2 775 aa7.08□□□□□ -1.28
RNU4-43P-201ENST00000410628 EHMT2Q96KQ7 1210 aa7.07□□□□□ -1.28
RNU4-43P-201ENST00000410628 OTUD5Q96G74 571 aa7.06□□□□□ -1.28
RNU4-43P-201ENST00000410628 PRR29P0C7W0 189 aa7.03□□□□□ -1.28
RNU4-43P-201ENST00000410628 CLCN6P51797 869 aa6.97□□□□□ -1.29
RNU4-43P-201ENST00000410628 CD44P16070 742 aaKnown RBP6.93□□□□□ -1.3
RNU4-43P-201ENST00000410628 FARP1Q9Y4F1 1045 aaPredicted RBP6.93□□□□□ -1.3
RNU4-43P-201ENST00000410628 FAM163AQ96GL9 167 aaPredicted RBP6.91□□□□□ -1.3
RNU4-43P-201ENST00000410628 SPDYE4A6NLX3 237 aa6.87□□□□□ -1.31
RNU4-43P-201ENST00000410628 CREBZFQ9NS37 354 aa6.87□□□□□ -1.31
RNU4-43P-201ENST00000410628 POTEB2H3BUK9 544 aa6.85□□□□□ -1.31
RNU4-43P-201ENST00000410628 CDAN1Q8IWY9 1227 aa6.83□□□□□ -1.32
RNU4-43P-201ENST00000410628 ZRANB1Q9UGI0 708 aa6.83□□□□□ -1.32
RNU4-43P-201ENST00000410628 MAMSTRQ6ZN01 415 aa6.79□□□□□ -1.32
RNU4-43P-201ENST00000410628 GALR2O43603 387 aaPredicted RBP6.78□□□□□ -1.32
RNU4-43P-201ENST00000410628 PHF12Q96QT6 1004 aa6.78□□□□□ -1.32
RNU4-43P-201ENST00000410628 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.33
RNU4-43P-201ENST00000410628 ZNF579Q8NAF0 562 aaKnown RBP6.76□□□□□ -1.33
RNU4-43P-201ENST00000410628 STAG3Q9UJ98 1225 aa6.76□□□□□ -1.33
RNU4-43P-201ENST00000410628 MMRN1Q13201 1228 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms