RNA–Protein interactions for RNA: ENST00000557399.1

LINC00645-203, long intergenic non-protein coding RNA 645, humanhuman

TSL 1 (best) BASIC

Gene LINC00645, Length 3,512 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00645-203ENST00000557399 AEBP2Q6ZN18 517 aaPredicted RBP10.18□□□□□ -0.78
LINC00645-203ENST00000557399 CHIC1Q5VXU3 224 aa10□□□□□ -0.81
LINC00645-203ENST00000557399 SENP3Q9H4L4 574 aaPredicted RBP8.81□□□□□ -1
LINC00645-203ENST00000557399 PHF23Q9BUL5 403 aaPredicted RBP8.66□□□□□ -1.02
LINC00645-203ENST00000557399 POTEDQ86YR6 584 aa8.34□□□□□ -1.07
LINC00645-203ENST00000557399 FOXD1Q16676 465 aa8.06□□□□□ -1.12
LINC00645-203ENST00000557399 PLPPR3Q6T4P5 718 aa8.06□□□□□ -1.12
LINC00645-203ENST00000557399 MSH5O43196 834 aa7.65□□□□□ -1.18
LINC00645-203ENST00000557399 PPP6R1Q9UPN7 881 aa7.57□□□□□ -1.2
LINC00645-203ENST00000557399 ADRA2BP18089 450 aa7.54□□□□□ -1.2
LINC00645-203ENST00000557399 PIAS4Q8N2W9 510 aaPredicted RBP7.52□□□□□ -1.21
LINC00645-203ENST00000557399 SCAF1Q9H7N4 1312 aaKnown RBP7.15□□□□□ -1.27
LINC00645-203ENST00000557399 DMRT2Q9Y5R5 561 aa7.04□□□□□ -1.28
LINC00645-203ENST00000557399 PPP4R3CPQ6ZMV5 832 aa7.02□□□□□ -1.29
LINC00645-203ENST00000557399 NISCHQ9Y2I1 1504 aa6.97□□□□□ -1.29
LINC00645-203ENST00000557399 DNAJC5BQ9UF47 199 aa6.96□□□□□ -1.3
LINC00645-203ENST00000557399 CNKSR2Q8WXI2 1034 aa6.95□□□□□ -1.3
LINC00645-203ENST00000557399 CCDC180Q9P1Z9 1646 aa6.94□□□□□ -1.3
LINC00645-203ENST00000557399 NCBP3Q53F19 620 aaKnown RBP6.92□□□□□ -1.3
LINC00645-203ENST00000557399 HOXD11P31277 338 aaPredicted RBP6.89□□□□□ -1.31
LINC00645-203ENST00000557399 RNF216Q9NWF9 866 aaPredicted RBP6.88□□□□□ -1.31
LINC00645-203ENST00000557399 MAPK8IP2Q13387 824 aaPredicted RBP6.83□□□□□ -1.32
LINC00645-203ENST00000557399 NPM3O75607 178 aaKnown RBP6.69□□□□□ -1.34
LINC00645-203ENST00000557399 KCNA4P22459 653 aa6.62□□□□□ -1.35
LINC00645-203ENST00000557399 SHROOM4Q9ULL8 1493 aa6.53□□□□□ -1.36
LINC00645-203ENST00000557399 MYO15BQ96JP2 1530 aa6.53□□□□□ -1.36
LINC00645-203ENST00000557399 RNF39Q9H2S5 420 aa6.48□□□□□ -1.37
LINC00645-203ENST00000557399 UNC13AQ9UPW8 1703 aa6.48□□□□□ -1.37
LINC00645-203ENST00000557399 C1QBPQ07021 282 aaKnown RBP6.45□□□□□ -1.38
LINC00645-203ENST00000557399 APLP2Q06481 763 aa6.38□□□□□ -1.39
LINC00645-203ENST00000557399 DCAF8L1A6NGE4 600 aa6.37□□□□□ -1.39
LINC00645-203ENST00000557399 SLC4A1APQ9BWU0 796 aaKnown RBP6.35□□□□□ -1.39
LINC00645-203ENST00000557399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.35□□□□□ -1.39
LINC00645-203ENST00000557399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.34□□□□□ -1.39
LINC00645-203ENST00000557399 HNRNPUL2Q1KMD3 747 aaKnown RBP6.34□□□□□ -1.39
LINC00645-203ENST00000557399 SLC4A2P04920 1241 aa6.34□□□□□ -1.39
LINC00645-203ENST00000557399 U3KPZ7 1027 aaPredicted RBP6.3□□□□□ -1.4
LINC00645-203ENST00000557399 NACADO15069 1562 aa6.3□□□□□ -1.4
LINC00645-203ENST00000557399 MYCNP04198 464 aaPredicted RBP6.29□□□□□ -1.4
LINC00645-203ENST00000557399 FOXD4L1Q9NU39 408 aa6.28□□□□□ -1.4
LINC00645-203ENST00000557399 BICRAQ9NZM4 1560 aa6.27□□□□□ -1.4
LINC00645-203ENST00000557399 SAMD1Q6SPF0 538 aaPredicted RBP6.27□□□□□ -1.41
LINC00645-203ENST00000557399 RB1CC1Q8TDY2 1594 aa6.26□□□□□ -1.41
LINC00645-203ENST00000557399 ATXN8OSP0DMR3 200 aa6.26□□□□□ -1.41
LINC00645-203ENST00000557399 POTEHQ6S545 545 aa6.25□□□□□ -1.41
LINC00645-203ENST00000557399 DCAF1Q9Y4B6 1507 aa6.25□□□□□ -1.41
LINC00645-203ENST00000557399 CACNB1Q02641 598 aaPredicted RBP6.23□□□□□ -1.41
LINC00645-203ENST00000557399 ZNF219Q9P2Y4 722 aaPredicted RBP6.16□□□□□ -1.42
LINC00645-203ENST00000557399 ZBTB22O15209 634 aa6.1□□□□□ -1.43
LINC00645-203ENST00000557399 DSG3P32926 999 aa6.08□□□□□ -1.44
LINC00645-203ENST00000557399 ZBTB12Q9Y330 459 aaPredicted RBP6.04□□□□□ -1.44
LINC00645-203ENST00000557399 ABCC9O60706 1549 aa6.03□□□□□ -1.44
LINC00645-203ENST00000557399 SPINK5Q9NQ38 1064 aaPredicted RBP6.02□□□□□ -1.45
LINC00645-203ENST00000557399 CAPN15O75808 1086 aa6.01□□□□□ -1.45
LINC00645-203ENST00000557399 CSRNP3Q8WYN3 585 aa6.01□□□□□ -1.45
LINC00645-203ENST00000557399 CUX2O14529 1486 aa5.96□□□□□ -1.46
LINC00645-203ENST00000557399 CC2D2AQ9P2K1 1620 aa5.94□□□□□ -1.46
LINC00645-203ENST00000557399 ATF5Q9Y2D1 282 aaPredicted RBP5.93□□□□□ -1.46
LINC00645-203ENST00000557399 PEG3Q9GZU2 1588 aa5.93□□□□□ -1.46
LINC00645-203ENST00000557399 DNAJC5Q9H3Z4 198 aa5.92□□□□□ -1.46
LINC00645-203ENST00000557399 EIF4G1Q04637 1599 aaKnown RBP5.91□□□□□ -1.46
LINC00645-203ENST00000557399 TRHP20396 242 aaPredicted RBP5.9□□□□□ -1.46
LINC00645-203ENST00000557399 THOC2Q8NI27 1593 aaKnown RBP5.9□□□□□ -1.46
LINC00645-203ENST00000557399 RBM42Q9BTD8 480 aaKnown RBP5.88□□□□□ -1.47
LINC00645-203ENST00000557399 POLA2Q14181 598 aa5.86□□□□□ -1.47
LINC00645-203ENST00000557399 ZCCHC6Q5VYS8 1495 aaKnown RBP5.86□□□□□ -1.47
LINC00645-203ENST00000557399 PRDM2Q13029 1718 aa5.85□□□□□ -1.47
LINC00645-203ENST00000557399 SMARCA2P51531 1590 aa5.84□□□□□ -1.47
LINC00645-203ENST00000557399 FBLN2P98095 1184 aa5.84□□□□□ -1.47
LINC00645-203ENST00000557399 HMGXB3Q12766 1538 aa5.83□□□□□ -1.48
LINC00645-203ENST00000557399 ABCB7O75027 752 aa5.81□□□□□ -1.48
LINC00645-203ENST00000557399 AKT1S1Q96B36 256 aa5.8□□□□□ -1.48
LINC00645-203ENST00000557399 EHMT2Q96KQ7 1210 aa5.79□□□□□ -1.48
LINC00645-203ENST00000557399 SPDYE2BA6NHP3 402 aa5.78□□□□□ -1.48
LINC00645-203ENST00000557399 SPDYE6P0CI01 402 aa5.78□□□□□ -1.48
LINC00645-203ENST00000557399 SPDYE2Q495Y8 402 aa5.78□□□□□ -1.48
LINC00645-203ENST00000557399 SSUH2Q9Y2M2 353 aa5.75□□□□□ -1.49
LINC00645-203ENST00000557399 MKRN4PQ13434 485 aaPredicted RBP5.74□□□□□ -1.49
LINC00645-203ENST00000557399 WDR97A6NE52 1622 aa5.71□□□□□ -1.5
LINC00645-203ENST00000557399 LAMC3Q9Y6N6 1575 aa5.7□□□□□ -1.5
LINC00645-203ENST00000557399 PROM2Q8N271 834 aa5.69□□□□□ -1.5
LINC00645-203ENST00000557399 WDR62O43379 1518 aa5.69□□□□□ -1.5
LINC00645-203ENST00000557399 NCAPD3P42695 1498 aa5.68□□□□□ -1.5
LINC00645-203ENST00000557399 CECR2Q9BXF3 1484 aa5.68□□□□□ -1.5
LINC00645-203ENST00000557399 OSCARQ8IYS5 282 aa5.65□□□□□ -1.51
LINC00645-203ENST00000557399 REM2Q8IYK8 340 aaPredicted RBP5.63□□□□□ -1.51
LINC00645-203ENST00000557399 KIF21AQ7Z4S6 1674 aa5.63□□□□□ -1.51
LINC00645-203ENST00000557399 SPDYE1Q8NFV5 336 aaPredicted RBP5.6□□□□□ -1.51
LINC00645-203ENST00000557399 STAG3Q9UJ98 1225 aa5.6□□□□□ -1.51
LINC00645-203ENST00000557399 ZNF692Q9BU19 519 aaPredicted RBP5.59□□□□□ -1.51
LINC00645-203ENST00000557399 SMARCA4P51532 1647 aa5.59□□□□□ -1.51
LINC00645-203ENST00000557399 FXR2P51116 673 aaKnown RBP eCLIP5.58□□□□□ -1.52
LINC00645-203ENST00000557399 SCRIBQ14160 1630 aa5.57□□□□□ -1.52
LINC00645-203ENST00000557399 SPDYE4A6NLX3 237 aa5.56□□□□□ -1.52
LINC00645-203ENST00000557399 CHRDL2Q6WN34 429 aa5.54□□□□□ -1.52
LINC00645-203ENST00000557399 PITPNM1O00562 1244 aa5.53□□□□□ -1.52
LINC00645-203ENST00000557399 BAZ1AQ9NRL2 1556 aaPredicted RBP5.53□□□□□ -1.52
LINC00645-203ENST00000557399 PABPN1Q86U42 306 aaKnown RBP eCLIP5.49□□□□□ -1.53
LINC00645-203ENST00000557399 CLCN6P51797 869 aa5.48□□□□□ -1.53
LINC00645-203ENST00000557399 PIP4P2Q8N4L2 257 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms