RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 AEBP2Q6ZN18 517 aaPredicted RBP11.52□□□□□ -0.57
RNU6-271P-201ENST00000363858 CHIC1Q5VXU3 224 aa11.13□□□□□ -0.63
RNU6-271P-201ENST00000363858 PHF23Q9BUL5 403 aaPredicted RBP9.86□□□□□ -0.83
RNU6-271P-201ENST00000363858 SENP3Q9H4L4 574 aaPredicted RBP9.63□□□□□ -0.87
RNU6-271P-201ENST00000363858 FOXD1Q16676 465 aa9.03□□□□□ -0.96
RNU6-271P-201ENST00000363858 PLPPR3Q6T4P5 718 aa8.95□□□□□ -0.98
RNU6-271P-201ENST00000363858 PPP6R1Q9UPN7 881 aa8.71□□□□□ -1.02
RNU6-271P-201ENST00000363858 ADRA2BP18089 450 aa8.66□□□□□ -1.02
RNU6-271P-201ENST00000363858 PIAS4Q8N2W9 510 aaPredicted RBP8.44□□□□□ -1.06
RNU6-271P-201ENST00000363858 MSH5O43196 834 aa8.23□□□□□ -1.09
RNU6-271P-201ENST00000363858 PPP4R3CPQ6ZMV5 832 aa7.92□□□□□ -1.14
RNU6-271P-201ENST00000363858 MAPK8IP2Q13387 824 aaPredicted RBP7.89□□□□□ -1.15
RNU6-271P-201ENST00000363858 SCAF1Q9H7N4 1312 aaKnown RBP7.76□□□□□ -1.17
RNU6-271P-201ENST00000363858 KCNA4P22459 653 aa7.75□□□□□ -1.17
RNU6-271P-201ENST00000363858 DMRT2Q9Y5R5 561 aa7.73□□□□□ -1.17
RNU6-271P-201ENST00000363858 CNKSR2Q8WXI2 1034 aa7.67□□□□□ -1.18
RNU6-271P-201ENST00000363858 POTEDQ86YR6 584 aa7.64□□□□□ -1.19
RNU6-271P-201ENST00000363858 NPM3O75607 178 aaKnown RBP7.62□□□□□ -1.19
RNU6-271P-201ENST00000363858 NCBP3Q53F19 620 aaKnown RBP7.61□□□□□ -1.19
RNU6-271P-201ENST00000363858 HOXD11P31277 338 aaPredicted RBP7.57□□□□□ -1.2
RNU6-271P-201ENST00000363858 RNF216Q9NWF9 866 aaPredicted RBP7.55□□□□□ -1.2
RNU6-271P-201ENST00000363858 DNAJC5BQ9UF47 199 aa7.41□□□□□ -1.22
RNU6-271P-201ENST00000363858 DCAF8L1A6NGE4 600 aa7.31□□□□□ -1.24
RNU6-271P-201ENST00000363858 SLC4A1APQ9BWU0 796 aaKnown RBP7.31□□□□□ -1.24
RNU6-271P-201ENST00000363858 SLC4A2P04920 1241 aa7.25□□□□□ -1.25
RNU6-271P-201ENST00000363858 ZBTB22O15209 634 aa7.21□□□□□ -1.26
RNU6-271P-201ENST00000363858 RNF39Q9H2S5 420 aa7.13□□□□□ -1.27
RNU6-271P-201ENST00000363858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.12□□□□□ -1.27
RNU6-271P-201ENST00000363858 U3KPZ7 1027 aaPredicted RBP7.11□□□□□ -1.27
RNU6-271P-201ENST00000363858 EHMT2Q96KQ7 1210 aa7.08□□□□□ -1.28
RNU6-271P-201ENST00000363858 FOXD4L1Q9NU39 408 aa7.08□□□□□ -1.28
RNU6-271P-201ENST00000363858 CSRNP3Q8WYN3 585 aa7.07□□□□□ -1.28
RNU6-271P-201ENST00000363858 MYCNP04198 464 aaPredicted RBP6.98□□□□□ -1.29
RNU6-271P-201ENST00000363858 C1QBPQ07021 282 aaKnown RBP6.97□□□□□ -1.29
RNU6-271P-201ENST00000363858 SPINK5Q9NQ38 1064 aaPredicted RBP6.93□□□□□ -1.3
RNU6-271P-201ENST00000363858 ATF5Q9Y2D1 282 aaPredicted RBP6.93□□□□□ -1.3
RNU6-271P-201ENST00000363858 CACNB1Q02641 598 aaPredicted RBP6.89□□□□□ -1.31
RNU6-271P-201ENST00000363858 SAMD1Q6SPF0 538 aaPredicted RBP6.86□□□□□ -1.31
RNU6-271P-201ENST00000363858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.84□□□□□ -1.31
RNU6-271P-201ENST00000363858 HNRNPUL2Q1KMD3 747 aaKnown RBP6.84□□□□□ -1.31
RNU6-271P-201ENST00000363858 ATXN8OSP0DMR3 200 aa6.81□□□□□ -1.32
RNU6-271P-201ENST00000363858 CAPN15O75808 1086 aa6.8□□□□□ -1.32
RNU6-271P-201ENST00000363858 TRHP20396 242 aaPredicted RBP6.77□□□□□ -1.33
RNU6-271P-201ENST00000363858 DSG3P32926 999 aa6.77□□□□□ -1.33
RNU6-271P-201ENST00000363858 ZNF219Q9P2Y4 722 aaPredicted RBP6.75□□□□□ -1.33
RNU6-271P-201ENST00000363858 APLP2Q06481 763 aa6.74□□□□□ -1.33
RNU6-271P-201ENST00000363858 ABCB7O75027 752 aa6.73□□□□□ -1.33
RNU6-271P-201ENST00000363858 POLA2Q14181 598 aa6.67□□□□□ -1.34
RNU6-271P-201ENST00000363858 MKRN4PQ13434 485 aaPredicted RBP6.61□□□□□ -1.35
RNU6-271P-201ENST00000363858 OSCARQ8IYS5 282 aa6.49□□□□□ -1.37
RNU6-271P-201ENST00000363858 ZBTB12Q9Y330 459 aaPredicted RBP6.48□□□□□ -1.37
RNU6-271P-201ENST00000363858 FBLN2P98095 1184 aa6.45□□□□□ -1.38
RNU6-271P-201ENST00000363858 SSUH2Q9Y2M2 353 aa6.38□□□□□ -1.39
RNU6-271P-201ENST00000363858 SPDYE2BA6NHP3 402 aa6.36□□□□□ -1.39
RNU6-271P-201ENST00000363858 SPDYE6P0CI01 402 aa6.36□□□□□ -1.39
RNU6-271P-201ENST00000363858 SPDYE2Q495Y8 402 aa6.36□□□□□ -1.39
RNU6-271P-201ENST00000363858 SPDYE4A6NLX3 237 aa6.34□□□□□ -1.39
RNU6-271P-201ENST00000363858 FKBP8Q14318 412 aa6.33□□□□□ -1.4
RNU6-271P-201ENST00000363858 RBM42Q9BTD8 480 aaKnown RBP6.33□□□□□ -1.4
RNU6-271P-201ENST00000363858 PROM2Q8N271 834 aa6.32□□□□□ -1.4
RNU6-271P-201ENST00000363858 ZNF692Q9BU19 519 aaPredicted RBP6.31□□□□□ -1.4
RNU6-271P-201ENST00000363858 AKT1S1Q96B36 256 aa6.3□□□□□ -1.4
RNU6-271P-201ENST00000363858 REM2Q8IYK8 340 aaPredicted RBP6.28□□□□□ -1.4
RNU6-271P-201ENST00000363858 PABPN1Q86U42 306 aaKnown RBP eCLIP6.27□□□□□ -1.41
RNU6-271P-201ENST00000363858 PITPNM1O00562 1244 aa6.23□□□□□ -1.41
RNU6-271P-201ENST00000363858 CHRDL2Q6WN34 429 aa6.16□□□□□ -1.42
RNU6-271P-201ENST00000363858 SPDYE1Q8NFV5 336 aaPredicted RBP6.16□□□□□ -1.42
RNU6-271P-201ENST00000363858 CLEC11AQ9Y240 323 aa6.13□□□□□ -1.43
RNU6-271P-201ENST00000363858 FXR2P51116 673 aaKnown RBP eCLIP6.12□□□□□ -1.43
RNU6-271P-201ENST00000363858 PIP4P2Q8N4L2 257 aa6.11□□□□□ -1.43
RNU6-271P-201ENST00000363858 CREBZFQ9NS37 354 aa6.09□□□□□ -1.43
RNU6-271P-201ENST00000363858 CHADLQ6NUI6 762 aa6.07□□□□□ -1.44
RNU6-271P-201ENST00000363858 STAG3Q9UJ98 1225 aa6.07□□□□□ -1.44
RNU6-271P-201ENST00000363858 PRR29P0C7W0 189 aa6.06□□□□□ -1.44
RNU6-271P-201ENST00000363858 MNX1P50219 401 aaPredicted RBP6.05□□□□□ -1.44
RNU6-271P-201ENST00000363858 VASPP50552 380 aaPredicted RBP6.04□□□□□ -1.44
RNU6-271P-201ENST00000363858 PRKAR2AP13861 404 aaKnown RBP6.03□□□□□ -1.44
RNU6-271P-201ENST00000363858 POTEHQ6S545 545 aa6.01□□□□□ -1.45
RNU6-271P-201ENST00000363858 FBXO3Q9UK99 471 aa6.01□□□□□ -1.45
RNU6-271P-201ENST00000363858 IFNLR1Q8IU57 520 aaPredicted RBP6□□□□□ -1.45
RNU6-271P-201ENST00000363858 MIER1Q8N108 512 aa5.97□□□□□ -1.45
RNU6-271P-201ENST00000363858 FARP1Q9Y4F1 1045 aaPredicted RBP5.97□□□□□ -1.45
RNU6-271P-201ENST00000363858 EVX2Q03828 476 aa5.94□□□□□ -1.46
RNU6-271P-201ENST00000363858 PLCD3Q8N3E9 789 aa5.94□□□□□ -1.46
RNU6-271P-201ENST00000363858 NUBP1P53384 320 aa5.93□□□□□ -1.46
RNU6-271P-201ENST00000363858 C19orf67A6NJJ6 358 aa5.92□□□□□ -1.46
RNU6-271P-201ENST00000363858 RASEFQ8IZ41 740 aa5.91□□□□□ -1.46
RNU6-271P-201ENST00000363858 NPM1P06748 294 aaKnown RBP eCLIP5.85□□□□□ -1.47
RNU6-271P-201ENST00000363858 CD44P16070 742 aaKnown RBP5.85□□□□□ -1.47
RNU6-271P-201ENST00000363858 KLHL34Q8N239 644 aa5.85□□□□□ -1.47
RNU6-271P-201ENST00000363858 SPOCK2Q92563 424 aa5.85□□□□□ -1.47
RNU6-271P-201ENST00000363858 HAX1O00165 279 aa5.84□□□□□ -1.47
RNU6-271P-201ENST00000363858 PLEKHG5O94827 1062 aa5.83□□□□□ -1.48
RNU6-271P-201ENST00000363858 ZBTB47Q9UFB7 747 aaPredicted RBP5.83□□□□□ -1.48
RNU6-271P-201ENST00000363858 CCDC61Q9Y6R9 512 aa5.83□□□□□ -1.48
RNU6-271P-201ENST00000363858 PHF12Q96QT6 1004 aa5.82□□□□□ -1.48
RNU6-271P-201ENST00000363858 TSPYL2Q9H2G4 693 aaPredicted RBP5.82□□□□□ -1.48
RNU6-271P-201ENST00000363858 ZNF579Q8NAF0 562 aaKnown RBP5.81□□□□□ -1.48
RNU6-271P-201ENST00000363858 PKD2Q13563 968 aa5.8□□□□□ -1.48
RNU6-271P-201ENST00000363858 ZRANB1Q9UGI0 708 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms