Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 Y_RNA.337-201ENST00000365312 102 ntBASIC3.34□□□□□ -1.87
SNCAIPQ9Y6H5 RNU6-418P-201ENST00000384035 107 ntBASIC3.34□□□□□ -1.87
SNCAIPQ9Y6H5 RNU6-376P-201ENST00000384731 106 ntBASIC3.34□□□□□ -1.87
SNCAIPQ9Y6H5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.34□□□□□ -1.87
SNCAIPQ9Y6H5 RPL30P4-201ENST00000429309 333 ntBASIC3.34□□□□□ -1.87
SNCAIPQ9Y6H5 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.34□□□□□ -1.87
SNCAIPQ9Y6H5 AC090515.1-201ENST00000465295 476 ntBASIC3.34□□□□□ -1.87
SNCAIPQ9Y6H5 AC010409.1-201ENST00000487382 476 ntBASIC3.34□□□□□ -1.87
SNCAIPQ9Y6H5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.34□□□□□ -1.87
SNCAIPQ9Y6H5 POLR3GP1-201ENST00000594073 261 ntBASIC3.34□□□□□ -1.87
SNCAIPQ9Y6H5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SNCAIPQ9Y6H5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
SNCAIPQ9Y6H5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 AC010332.2-201ENST00000613083 1904 ntBASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 AL356292.1-201ENST00000283110 373 ntBASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-199P-201ENST00000362954 107 ntBASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 MIR15B-201ENST00000385045 98 ntBASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-1154P-201ENST00000391001 104 ntBASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-1228P-201ENST00000391014 107 ntBASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-1328P-201ENST00000410938 106 ntBASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 RPS26P55-201ENST00000471178 356 ntBASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 RNA5SP20-201ENST00000515976 84 ntBASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-561P-201ENST00000516222 102 ntBASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-313P-201ENST00000516317 112 ntBASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-948P-201ENST00000516374 107 ntBASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 AC138915.1-201ENST00000565427 1685 ntBASIC3.33□□□□□ -1.88
SNCAIPQ9Y6H5 AC093010.3-201ENST00000570269 15214 ntBASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-859P-201ENST00000362728 107 ntBASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-728P-201ENST00000365375 104 ntBASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 SNORD37.2-201ENST00000391075 66 ntBASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 AL138827.1-201ENST00000402666 306 ntBASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 RPL30P13-201ENST00000418873 348 ntBASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-63P-201ENST00000516690 95 ntBASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 AC245166.1-201ENST00000521012 253 ntBASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 MIR3199-1-201ENST00000582434 88 ntBASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 AC005972.2-201ENST00000604690 348 ntBASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SNCAIPQ9Y6H5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 SNORA20-201ENST00000384662 132 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 MIR181A2-201ENST00000384863 110 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 MIR9-1-201ENST00000385198 89 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 SNORA40-201ENST00000388090 126 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 RNA5SP508-201ENST00000411327 119 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 TRBV12-1-201ENST00000479785 344 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 AC092185.1-201ENST00000491371 97 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 RPL23AP54-201ENST00000495129 419 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 RNU1-41P-201ENST00000516161 162 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-479P-201ENST00000516348 105 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 RNU1-48P-201ENST00000516400 162 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 SCARNA3-201ENST00000517097 143 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 SNORA31.26-201ENST00000517250 137 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 AP003357.1-201ENST00000604497 148 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 AL159152.1-201ENST00000635019 2587 ntBASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
SNCAIPQ9Y6H5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-1290P-201ENST00000362957 109 ntBASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-743P-201ENST00000364151 106 ntBASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-643P-201ENST00000384018 107 ntBASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-1323P-201ENST00000384025 107 ntBASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 RPL32P35-201ENST00000415214 394 ntBASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 AC104332.2-201ENST00000429959 156 ntBASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 AL513328.1-201ENST00000446460 224 ntBASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 HMGN2P18-201ENST00000450680 270 ntBASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 AC080013.2-201ENST00000460866 323 ntBASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 AC025647.1-201ENST00000517879 253 ntBASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 AL365222.1-201ENST00000614661 98 ntBASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 MIR1248-201ENST00000629190 106 ntBASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SNCAIPQ9Y6H5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.29□□□□□ -1.88
SNCAIPQ9Y6H5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SNCAIPQ9Y6H5 SNORD21-201ENST00000383953 95 ntBASIC3.29□□□□□ -1.88
SNCAIPQ9Y6H5 RPL21P3-201ENST00000395517 478 ntBASIC3.29□□□□□ -1.88
SNCAIPQ9Y6H5 RNA5SP274-201ENST00000410484 108 ntBASIC3.29□□□□□ -1.88
SNCAIPQ9Y6H5 RNA5SP21-201ENST00000410917 96 ntBASIC3.29□□□□□ -1.88
SNCAIPQ9Y6H5 AC016925.1-201ENST00000458303 298 ntBASIC3.29□□□□□ -1.88
SNCAIPQ9Y6H5 CKS1BP2-201ENST00000497342 240 ntBASIC3.29□□□□□ -1.88
SNCAIPQ9Y6H5 SEM1P1-201ENST00000506694 209 ntBASIC3.29□□□□□ -1.88
SNCAIPQ9Y6H5 RNU7-116P-201ENST00000516940 62 ntBASIC3.29□□□□□ -1.88
SNCAIPQ9Y6H5 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.29□□□□□ -1.88
SNCAIPQ9Y6H5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms