RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 AEBP2Q6ZN18 517 aaPredicted RBP13.74□□□□□ -0.21
RNU6-1228P-201ENST00000391014 CHIC1Q5VXU3 224 aa12.94□□□□□ -0.34
RNU6-1228P-201ENST00000391014 SENP3Q9H4L4 574 aaPredicted RBP11.61□□□□□ -0.55
RNU6-1228P-201ENST00000391014 PHF23Q9BUL5 403 aaPredicted RBP11.52□□□□□ -0.57
RNU6-1228P-201ENST00000391014 FOXD1Q16676 465 aa10.91□□□□□ -0.66
RNU6-1228P-201ENST00000391014 PLPPR3Q6T4P5 718 aa10.28□□□□□ -0.76
RNU6-1228P-201ENST00000391014 PPP6R1Q9UPN7 881 aa10.23□□□□□ -0.77
RNU6-1228P-201ENST00000391014 ADRA2BP18089 450 aa10.16□□□□□ -0.78
RNU6-1228P-201ENST00000391014 PIAS4Q8N2W9 510 aaPredicted RBP10.14□□□□□ -0.79
RNU6-1228P-201ENST00000391014 MSH5O43196 834 aa10.13□□□□□ -0.79
RNU6-1228P-201ENST00000391014 POTEDQ86YR6 584 aa10.04□□□□□ -0.8
RNU6-1228P-201ENST00000391014 MAPK8IP2Q13387 824 aaPredicted RBP9.38□□□□□ -0.91
RNU6-1228P-201ENST00000391014 DMRT2Q9Y5R5 561 aa9.23□□□□□ -0.93
RNU6-1228P-201ENST00000391014 SCAF1Q9H7N4 1312 aaKnown RBP9.17□□□□□ -0.94
RNU6-1228P-201ENST00000391014 PPP4R3CPQ6ZMV5 832 aa9.06□□□□□ -0.96
RNU6-1228P-201ENST00000391014 HOXD11P31277 338 aaPredicted RBP8.88□□□□□ -0.99
RNU6-1228P-201ENST00000391014 DCAF8L1A6NGE4 600 aa8.85□□□□□ -0.99
RNU6-1228P-201ENST00000391014 CNKSR2Q8WXI2 1034 aa8.85□□□□□ -0.99
RNU6-1228P-201ENST00000391014 RNF216Q9NWF9 866 aaPredicted RBP8.79□□□□□ -1
RNU6-1228P-201ENST00000391014 CACNB1Q02641 598 aaPredicted RBP8.75□□□□□ -1.01
RNU6-1228P-201ENST00000391014 RNF39Q9H2S5 420 aa8.69□□□□□ -1.02
RNU6-1228P-201ENST00000391014 NCBP3Q53F19 620 aaKnown RBP8.61□□□□□ -1.03
RNU6-1228P-201ENST00000391014 NPM3O75607 178 aaKnown RBP8.59□□□□□ -1.03
RNU6-1228P-201ENST00000391014 C1QBPQ07021 282 aaKnown RBP8.52□□□□□ -1.05
RNU6-1228P-201ENST00000391014 DNAJC5BQ9UF47 199 aa8.52□□□□□ -1.05
RNU6-1228P-201ENST00000391014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.44□□□□□ -1.06
RNU6-1228P-201ENST00000391014 KCNA4P22459 653 aa8.4□□□□□ -1.06
RNU6-1228P-201ENST00000391014 U3KPZ7 1027 aaPredicted RBP8.3□□□□□ -1.08
RNU6-1228P-201ENST00000391014 SLC4A2P04920 1241 aa8.24□□□□□ -1.09
RNU6-1228P-201ENST00000391014 SPINK5Q9NQ38 1064 aaPredicted RBP8.22□□□□□ -1.09
RNU6-1228P-201ENST00000391014 CAPN15O75808 1086 aa8.15□□□□□ -1.1
RNU6-1228P-201ENST00000391014 DSG3P32926 999 aa8.14□□□□□ -1.11
RNU6-1228P-201ENST00000391014 TRHP20396 242 aaPredicted RBP8.03□□□□□ -1.12
RNU6-1228P-201ENST00000391014 ABCB7O75027 752 aa8□□□□□ -1.13
RNU6-1228P-201ENST00000391014 ZNF219Q9P2Y4 722 aaPredicted RBP7.94□□□□□ -1.14
RNU6-1228P-201ENST00000391014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.93□□□□□ -1.14
RNU6-1228P-201ENST00000391014 HNRNPUL2Q1KMD3 747 aaKnown RBP7.93□□□□□ -1.14
RNU6-1228P-201ENST00000391014 APLP2Q06481 763 aa7.92□□□□□ -1.14
RNU6-1228P-201ENST00000391014 SAMD1Q6SPF0 538 aaPredicted RBP7.91□□□□□ -1.14
RNU6-1228P-201ENST00000391014 MYCNP04198 464 aaPredicted RBP7.88□□□□□ -1.15
RNU6-1228P-201ENST00000391014 SLC4A1APQ9BWU0 796 aaKnown RBP7.87□□□□□ -1.15
RNU6-1228P-201ENST00000391014 POTEHQ6S545 545 aa7.84□□□□□ -1.15
RNU6-1228P-201ENST00000391014 POLA2Q14181 598 aa7.82□□□□□ -1.16
RNU6-1228P-201ENST00000391014 ATF5Q9Y2D1 282 aaPredicted RBP7.82□□□□□ -1.16
RNU6-1228P-201ENST00000391014 FOXD4L1Q9NU39 408 aa7.78□□□□□ -1.16
RNU6-1228P-201ENST00000391014 ZBTB22O15209 634 aa7.76□□□□□ -1.17
RNU6-1228P-201ENST00000391014 RBM42Q9BTD8 480 aaKnown RBP7.67□□□□□ -1.18
RNU6-1228P-201ENST00000391014 CHRDL2Q6WN34 429 aa7.58□□□□□ -1.2
RNU6-1228P-201ENST00000391014 OSCARQ8IYS5 282 aa7.55□□□□□ -1.2
RNU6-1228P-201ENST00000391014 ZBTB12Q9Y330 459 aaPredicted RBP7.54□□□□□ -1.2
RNU6-1228P-201ENST00000391014 AKT1S1Q96B36 256 aa7.53□□□□□ -1.2
RNU6-1228P-201ENST00000391014 ATXN8OSP0DMR3 200 aa7.52□□□□□ -1.21
RNU6-1228P-201ENST00000391014 REM2Q8IYK8 340 aaPredicted RBP7.5□□□□□ -1.21
RNU6-1228P-201ENST00000391014 MKRN4PQ13434 485 aaPredicted RBP7.43□□□□□ -1.22
RNU6-1228P-201ENST00000391014 PITPNM1O00562 1244 aa7.42□□□□□ -1.22
RNU6-1228P-201ENST00000391014 PIP4P2Q8N4L2 257 aa7.42□□□□□ -1.22
RNU6-1228P-201ENST00000391014 FXR2P51116 673 aaKnown RBP eCLIP7.37□□□□□ -1.23
RNU6-1228P-201ENST00000391014 FBLN2P98095 1184 aa7.37□□□□□ -1.23
RNU6-1228P-201ENST00000391014 SPDYE2BA6NHP3 402 aa7.35□□□□□ -1.23
RNU6-1228P-201ENST00000391014 SPDYE6P0CI01 402 aa7.35□□□□□ -1.23
RNU6-1228P-201ENST00000391014 SPDYE2Q495Y8 402 aa7.35□□□□□ -1.23
RNU6-1228P-201ENST00000391014 CSRNP3Q8WYN3 585 aa7.34□□□□□ -1.23
RNU6-1228P-201ENST00000391014 SP7Q8TDD2 431 aaPredicted RBP7.31□□□□□ -1.24
RNU6-1228P-201ENST00000391014 ZNF692Q9BU19 519 aaPredicted RBP7.29□□□□□ -1.24
RNU6-1228P-201ENST00000391014 HAX1O00165 279 aa7.28□□□□□ -1.24
RNU6-1228P-201ENST00000391014 EVX2Q03828 476 aa7.28□□□□□ -1.24
RNU6-1228P-201ENST00000391014 SSUH2Q9Y2M2 353 aa7.28□□□□□ -1.24
RNU6-1228P-201ENST00000391014 CLEC11AQ9Y240 323 aa7.26□□□□□ -1.25
RNU6-1228P-201ENST00000391014 SPDYE1Q8NFV5 336 aaPredicted RBP7.23□□□□□ -1.25
RNU6-1228P-201ENST00000391014 PRKAR2AP13861 404 aaKnown RBP7.22□□□□□ -1.25
RNU6-1228P-201ENST00000391014 EHMT2Q96KQ7 1210 aa7.2□□□□□ -1.26
RNU6-1228P-201ENST00000391014 PABPN1Q86U42 306 aaKnown RBP eCLIP7.19□□□□□ -1.26
RNU6-1228P-201ENST00000391014 CHADLQ6NUI6 762 aa7.18□□□□□ -1.26
RNU6-1228P-201ENST00000391014 C19orf67A6NJJ6 358 aa7.13□□□□□ -1.27
RNU6-1228P-201ENST00000391014 PRR29P0C7W0 189 aa7.12□□□□□ -1.27
RNU6-1228P-201ENST00000391014 GABBR2O75899 941 aa7.05□□□□□ -1.28
RNU6-1228P-201ENST00000391014 FARP1Q9Y4F1 1045 aaPredicted RBP7.02□□□□□ -1.29
RNU6-1228P-201ENST00000391014 SPDYE4A6NLX3 237 aa6.99□□□□□ -1.29
RNU6-1228P-201ENST00000391014 CREBZFQ9NS37 354 aa6.98□□□□□ -1.29
RNU6-1228P-201ENST00000391014 CD44P16070 742 aaKnown RBP6.97□□□□□ -1.29
RNU6-1228P-201ENST00000391014 POTEIP0CG38 1075 aa6.94□□□□□ -1.3
RNU6-1228P-201ENST00000391014 STAG3Q9UJ98 1225 aa6.92□□□□□ -1.3
RNU6-1228P-201ENST00000391014 ZRANB1Q9UGI0 708 aa6.88□□□□□ -1.31
RNU6-1228P-201ENST00000391014 MNX1P50219 401 aaPredicted RBP6.87□□□□□ -1.31
RNU6-1228P-201ENST00000391014 LHX8Q68G74 356 aa6.87□□□□□ -1.31
RNU6-1228P-201ENST00000391014 ZNF579Q8NAF0 562 aaKnown RBP6.86□□□□□ -1.31
RNU6-1228P-201ENST00000391014 PROM2Q8N271 834 aa6.84□□□□□ -1.31
RNU6-1228P-201ENST00000391014 GALR2O43603 387 aaPredicted RBP6.83□□□□□ -1.32
RNU6-1228P-201ENST00000391014 CLCN6P51797 869 aa6.81□□□□□ -1.32
RNU6-1228P-201ENST00000391014 PHF12Q96QT6 1004 aa6.81□□□□□ -1.32
RNU6-1228P-201ENST00000391014 DCBLD2Q96PD2 775 aa6.8□□□□□ -1.32
RNU6-1228P-201ENST00000391014 NPM1P06748 294 aaKnown RBP eCLIP6.76□□□□□ -1.33
RNU6-1228P-201ENST00000391014 PAK3O75914 559 aaPredicted RBP6.74□□□□□ -1.33
RNU6-1228P-201ENST00000391014 PELP1Q8IZL8 1130 aaKnown RBP6.74□□□□□ -1.33
RNU6-1228P-201ENST00000391014 POTEB2H3BUK9 544 aa6.73□□□□□ -1.33
RNU6-1228P-201ENST00000391014 TSPYL2Q9H2G4 693 aaPredicted RBP6.71□□□□□ -1.34
RNU6-1228P-201ENST00000391014 MS4A3Q96HJ5 214 aa6.7□□□□□ -1.34
RNU6-1228P-201ENST00000391014 MIER1Q8N108 512 aa6.69□□□□□ -1.34
RNU6-1228P-201ENST00000391014 CCDC61Q9Y6R9 512 aa6.68□□□□□ -1.34
RNU6-1228P-201ENST00000391014 OTUD5Q96G74 571 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms