RNA–Protein interactions for RNA: ENST00000362957.1

RNU6-1290P-201, Transcript of RNA, U6 small nuclear 1290, pseudogene, humanhuman

BASIC

Gene RNU6-1290P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1290P-201ENST00000362957 AEBP2Q6ZN18 517 aaPredicted RBP19.37■□□□□ 0.69
RNU6-1290P-201ENST00000362957 CHIC1Q5VXU3 224 aa18.18■□□□□ 0.5
RNU6-1290P-201ENST00000362957 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
RNU6-1290P-201ENST00000362957 PHF23Q9BUL5 403 aaPredicted RBP16.39■□□□□ 0.21
RNU6-1290P-201ENST00000362957 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
RNU6-1290P-201ENST00000362957 FOXD1Q16676 465 aa15.66■□□□□ 0.1
RNU6-1290P-201ENST00000362957 MSH5O43196 834 aa15.04■□□□□ -0
RNU6-1290P-201ENST00000362957 PIAS4Q8N2W9 510 aaPredicted RBP14.44□□□□□ -0.1
RNU6-1290P-201ENST00000362957 PPP6R1Q9UPN7 881 aa13.97□□□□□ -0.17
RNU6-1290P-201ENST00000362957 ADRA2BP18089 450 aa13.88□□□□□ -0.19
RNU6-1290P-201ENST00000362957 PLPPR3Q6T4P5 718 aa13.73□□□□□ -0.21
RNU6-1290P-201ENST00000362957 CACNB1Q02641 598 aaPredicted RBP13.42□□□□□ -0.26
RNU6-1290P-201ENST00000362957 DMRT2Q9Y5R5 561 aa13.12□□□□□ -0.31
RNU6-1290P-201ENST00000362957 MAPK8IP2Q13387 824 aaPredicted RBP13□□□□□ -0.33
RNU6-1290P-201ENST00000362957 SCAF1Q9H7N4 1312 aaKnown RBP12.81□□□□□ -0.36
RNU6-1290P-201ENST00000362957 RNF39Q9H2S5 420 aa12.72□□□□□ -0.37
RNU6-1290P-201ENST00000362957 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
RNU6-1290P-201ENST00000362957 C1QBPQ07021 282 aaKnown RBP12.53□□□□□ -0.4
RNU6-1290P-201ENST00000362957 POTEHQ6S545 545 aa12.45□□□□□ -0.42
RNU6-1290P-201ENST00000362957 HOXD11P31277 338 aaPredicted RBP12.31□□□□□ -0.44
RNU6-1290P-201ENST00000362957 DNAJC5BQ9UF47 199 aa12.1□□□□□ -0.47
RNU6-1290P-201ENST00000362957 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
RNU6-1290P-201ENST00000362957 PPP4R3CPQ6ZMV5 832 aa11.9□□□□□ -0.5
RNU6-1290P-201ENST00000362957 CNKSR2Q8WXI2 1034 aa11.9□□□□□ -0.5
RNU6-1290P-201ENST00000362957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.75□□□□□ -0.53
RNU6-1290P-201ENST00000362957 DSG3P32926 999 aa11.62□□□□□ -0.55
RNU6-1290P-201ENST00000362957 CAPN15O75808 1086 aa11.51□□□□□ -0.57
RNU6-1290P-201ENST00000362957 SPINK5Q9NQ38 1064 aaPredicted RBP11.44□□□□□ -0.58
RNU6-1290P-201ENST00000362957 U3KPZ7 1027 aaPredicted RBP11.36□□□□□ -0.59
RNU6-1290P-201ENST00000362957 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.61
RNU6-1290P-201ENST00000362957 NCBP3Q53F19 620 aaKnown RBP11.24□□□□□ -0.61
RNU6-1290P-201ENST00000362957 CHRDL2Q6WN34 429 aa11.22□□□□□ -0.61
RNU6-1290P-201ENST00000362957 RBM42Q9BTD8 480 aaKnown RBP11.17□□□□□ -0.62
RNU6-1290P-201ENST00000362957 ABCB7O75027 752 aa11.13□□□□□ -0.63
RNU6-1290P-201ENST00000362957 TRHP20396 242 aaPredicted RBP11.12□□□□□ -0.63
RNU6-1290P-201ENST00000362957 ZNF219Q9P2Y4 722 aaPredicted RBP11.09□□□□□ -0.63
RNU6-1290P-201ENST00000362957 APLP2Q06481 763 aa11.06□□□□□ -0.64
RNU6-1290P-201ENST00000362957 NPM3O75607 178 aaKnown RBP11□□□□□ -0.65
RNU6-1290P-201ENST00000362957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.83□□□□□ -0.68
RNU6-1290P-201ENST00000362957 HAX1O00165 279 aa10.83□□□□□ -0.68
RNU6-1290P-201ENST00000362957 HNRNPUL2Q1KMD3 747 aaKnown RBP10.83□□□□□ -0.68
RNU6-1290P-201ENST00000362957 PIP4P2Q8N4L2 257 aa10.75□□□□□ -0.69
RNU6-1290P-201ENST00000362957 SLC4A2P04920 1241 aa10.71□□□□□ -0.69
RNU6-1290P-201ENST00000362957 AKT1S1Q96B36 256 aa10.71□□□□□ -0.69
RNU6-1290P-201ENST00000362957 SAMD1Q6SPF0 538 aaPredicted RBP10.7□□□□□ -0.7
RNU6-1290P-201ENST00000362957 POLA2Q14181 598 aa10.63□□□□□ -0.71
RNU6-1290P-201ENST00000362957 PLSCR2Q9NRY7 297 aa10.61□□□□□ -0.71
RNU6-1290P-201ENST00000362957 REM2Q8IYK8 340 aaPredicted RBP10.59□□□□□ -0.71
RNU6-1290P-201ENST00000362957 FXR2P51116 673 aaKnown RBP eCLIP10.57□□□□□ -0.72
RNU6-1290P-201ENST00000362957 LHX8Q68G74 356 aa10.57□□□□□ -0.72
RNU6-1290P-201ENST00000362957 EVX2Q03828 476 aa10.56□□□□□ -0.72
RNU6-1290P-201ENST00000362957 PITPNM1O00562 1244 aa10.46□□□□□ -0.73
RNU6-1290P-201ENST00000362957 ZBTB12Q9Y330 459 aaPredicted RBP10.38□□□□□ -0.75
RNU6-1290P-201ENST00000362957 GABBR2O75899 941 aa10.33□□□□□ -0.76
RNU6-1290P-201ENST00000362957 OSCARQ8IYS5 282 aa10.28□□□□□ -0.76
RNU6-1290P-201ENST00000362957 C19orf67A6NJJ6 358 aa10.25□□□□□ -0.77
RNU6-1290P-201ENST00000362957 MYCNP04198 464 aaPredicted RBP10.23□□□□□ -0.77
RNU6-1290P-201ENST00000362957 PRKAR2AP13861 404 aaKnown RBP10.21□□□□□ -0.77
RNU6-1290P-201ENST00000362957 POTEIP0CG38 1075 aa10.06□□□□□ -0.8
RNU6-1290P-201ENST00000362957 CLEC11AQ9Y240 323 aa10.03□□□□□ -0.8
RNU6-1290P-201ENST00000362957 KCNA4P22459 653 aa10.02□□□□□ -0.81
RNU6-1290P-201ENST00000362957 SPDYE1Q8NFV5 336 aaPredicted RBP10.01□□□□□ -0.81
RNU6-1290P-201ENST00000362957 ATF5Q9Y2D1 282 aaPredicted RBP10□□□□□ -0.81
RNU6-1290P-201ENST00000362957 POTEMA6NI47 508 aa9.99□□□□□ -0.81
RNU6-1290P-201ENST00000362957 SPDYE2BA6NHP3 402 aa9.97□□□□□ -0.81
RNU6-1290P-201ENST00000362957 SPDYE6P0CI01 402 aa9.97□□□□□ -0.81
RNU6-1290P-201ENST00000362957 SPDYE2Q495Y8 402 aa9.97□□□□□ -0.81
RNU6-1290P-201ENST00000362957 CLCN6P51797 869 aa9.96□□□□□ -0.82
RNU6-1290P-201ENST00000362957 PCDH10Q9P2E7 1040 aa9.95□□□□□ -0.82
RNU6-1290P-201ENST00000362957 POTEGQ6S5H5 508 aa9.93□□□□□ -0.82
RNU6-1290P-201ENST00000362957 DCBLD2Q96PD2 775 aa9.9□□□□□ -0.82
RNU6-1290P-201ENST00000362957 CHADLQ6NUI6 762 aa9.89□□□□□ -0.83
RNU6-1290P-201ENST00000362957 OTUD5Q96G74 571 aa9.87□□□□□ -0.83
RNU6-1290P-201ENST00000362957 CD44P16070 742 aaKnown RBP9.83□□□□□ -0.84
RNU6-1290P-201ENST00000362957 PRR29P0C7W0 189 aa9.76□□□□□ -0.85
RNU6-1290P-201ENST00000362957 FBLN2P98095 1184 aa9.76□□□□□ -0.85
RNU6-1290P-201ENST00000362957 ZNF692Q9BU19 519 aaPredicted RBP9.72□□□□□ -0.85
RNU6-1290P-201ENST00000362957 POTEB2H3BUK9 544 aa9.71□□□□□ -0.86
RNU6-1290P-201ENST00000362957 SSUH2Q9Y2M2 353 aa9.7□□□□□ -0.86
RNU6-1290P-201ENST00000362957 FARP1Q9Y4F1 1045 aaPredicted RBP9.68□□□□□ -0.86
RNU6-1290P-201ENST00000362957 FOXD4L1Q9NU39 408 aa9.65□□□□□ -0.86
RNU6-1290P-201ENST00000362957 ZNF579Q8NAF0 562 aaKnown RBP9.64□□□□□ -0.87
RNU6-1290P-201ENST00000362957 ZRANB1Q9UGI0 708 aa9.57□□□□□ -0.88
RNU6-1290P-201ENST00000362957 GALR2O43603 387 aaPredicted RBP9.56□□□□□ -0.88
RNU6-1290P-201ENST00000362957 PABPN1Q86U42 306 aaKnown RBP eCLIP9.52□□□□□ -0.89
RNU6-1290P-201ENST00000362957 FAM163AQ96GL9 167 aaPredicted RBP9.52□□□□□ -0.89
RNU6-1290P-201ENST00000362957 LCE2DQ5TA82 110 aaPredicted RBP9.51□□□□□ -0.89
RNU6-1290P-201ENST00000362957 MAMSTRQ6ZN01 415 aa9.51□□□□□ -0.89
RNU6-1290P-201ENST00000362957 MKRN4PQ13434 485 aaPredicted RBP9.5□□□□□ -0.89
RNU6-1290P-201ENST00000362957 ATXN8OSP0DMR3 200 aa9.47□□□□□ -0.89
RNU6-1290P-201ENST00000362957 PELP1Q8IZL8 1130 aaKnown RBP9.44□□□□□ -0.9
RNU6-1290P-201ENST00000362957 POTEJP0CG39 1038 aa9.41□□□□□ -0.9
RNU6-1290P-201ENST00000362957 CDAN1Q8IWY9 1227 aa9.41□□□□□ -0.9
RNU6-1290P-201ENST00000362957 METRNQ9UJH8 293 aa9.41□□□□□ -0.9
RNU6-1290P-201ENST00000362957 C7P10643 843 aa9.39□□□□□ -0.91
RNU6-1290P-201ENST00000362957 SCUBE2Q9NQ36 999 aa9.39□□□□□ -0.91
RNU6-1290P-201ENST00000362957 SLC39A7Q92504 469 aa9.38□□□□□ -0.91
RNU6-1290P-201ENST00000362957 PAK3O75914 559 aaPredicted RBP9.35□□□□□ -0.91
RNU6-1290P-201ENST00000362957 ASTLQ6HA08 431 aaPredicted RBP9.33□□□□□ -0.92
RNU6-1290P-201ENST00000362957 PHF12Q96QT6 1004 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms