Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TNFRSF1AP19438 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
TNFRSF1AP19438 MIR494-201ENST00000349529 81 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 MIR208A-201ENST00000362287 71 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 U3.8-201ENST00000363675 217 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 RNA5SP387-201ENST00000364226 106 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 RNU4-41P-201ENST00000364426 143 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 RNU6-487P-201ENST00000365430 104 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 RNU6-813P-201ENST00000384691 107 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 MIR147B-201ENST00000390185 80 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 RNA5SP201-201ENST00000410316 124 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFRSF1AP19438 AC008155.2-201ENST00000464337 397 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 AC010531.2-201ENST00000465012 153 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 AC021205.2-201ENST00000480069 347 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 RNU6-1337P-201ENST00000516525 95 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 MIR5006-201ENST00000583027 110 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 POLR3GP1-201ENST00000594073 261 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 AL049861.1-201ENST00000603130 150 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 RNU6-94P-201ENST00000607728 107 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 PCGEM1.1-201ENST00000613431 131 ntBASIC2.8□□□□□ -1.96
TNFRSF1AP19438 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TNFRSF1AP19438 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TNFRSF1AP19438 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFRSF1AP19438 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TNFRSF1AP19438 Y_RNA.323-201ENST00000365157 109 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 SNORA18.2-201ENST00000383865 132 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 RNU6-1323P-201ENST00000384025 107 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 SNORA67.2-201ENST00000384300 149 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 RNU6-1113P-201ENST00000384348 107 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 RNVU1-14-201ENST00000384770 164 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 MIR590-201ENST00000385008 97 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 MIR891A-201ENST00000401237 79 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 AL590004.2-201ENST00000404787 371 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 CST9LP2-201ENST00000437612 320 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 AC006539.3-201ENST00000454258 129 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 AL441985.1-201ENST00000457727 251 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 RPL23AP54-201ENST00000495129 419 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.79□□□□□ -1.96
TNFRSF1AP19438 RNA5SP153-201ENST00000516498 76 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 RNU1-104P-201ENST00000517280 175 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.79□□□□□ -1.96
TNFRSF1AP19438 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
TNFRSF1AP19438 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.79□□□□□ -1.96
TNFRSF1AP19438 AC097639.2-201ENST00000603159 172 ntBASIC2.79□□□□□ -1.96
TNFRSF1AP19438 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
TNFRSF1AP19438 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TNFRSF1AP19438 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
TNFRSF1AP19438 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
TNFRSF1AP19438 AL136360.1-201ENST00000503377 1900 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 RNU6-228P-201ENST00000362700 106 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 SNORA63.5-201ENST00000363548 123 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 RNU6-674P-201ENST00000363831 107 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 SNORA38.1-201ENST00000364172 131 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 Y_RNA.634-201ENST00000364811 113 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 MIR548B-201ENST00000385247 97 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 SNORA11.1-201ENST00000408133 129 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 RNU2-70P-201ENST00000410718 179 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 RNU4-47P-201ENST00000410876 114 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 RNA5SP120-201ENST00000410900 112 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 CYCSP48-201ENST00000417124 323 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 AC005326.1-201ENST00000429197 123 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 RPL23AP7-203ENST00000449021 469 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.78□□□□□ -1.96
TNFRSF1AP19438 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.78□□□□□ -1.96
TNFRSF1AP19438 AC015720.1-201ENST00000565251 277 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 MALAT1.1-201ENST00000618249 95 ntBASIC2.78□□□□□ -1.96
TNFRSF1AP19438 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
TNFRSF1AP19438 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
TNFRSF1AP19438 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
TNFRSF1AP19438 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.77□□□□□ -1.97
TNFRSF1AP19438 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TNFRSF1AP19438 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
TNFRSF1AP19438 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.77□□□□□ -1.97
TNFRSF1AP19438 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TNFRSF1AP19438 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
TNFRSF1AP19438 Y_RNA.49-201ENST00000362714 112 ntBASIC2.77□□□□□ -1.97
TNFRSF1AP19438 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TNFRSF1AP19438 MIR873-201ENST00000401120 77 ntBASIC2.77□□□□□ -1.97
TNFRSF1AP19438 AL445687.1-201ENST00000439946 251 ntBASIC2.77□□□□□ -1.97
TNFRSF1AP19438 RPS27P29-201ENST00000463110 252 ntBASIC2.77□□□□□ -1.97
TNFRSF1AP19438 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.77□□□□□ -1.97
TNFRSF1AP19438 SRIP1-201ENST00000489235 288 ntBASIC2.77□□□□□ -1.97
TNFRSF1AP19438 SNORA18.4-201ENST00000516440 124 ntBASIC2.77□□□□□ -1.97
TNFRSF1AP19438 EIF4A1P12-201ENST00000551910 141 ntBASIC2.77□□□□□ -1.97
TNFRSF1AP19438 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.77□□□□□ -1.97
TNFRSF1AP19438 AC007179.3-201ENST00000604976 235 ntBASIC2.77□□□□□ -1.97
TNFRSF1AP19438 SNORD115-40-201ENST00000606510 82 ntBASIC2.77□□□□□ -1.97
TNFRSF1AP19438 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TNFRSF1AP19438 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
TNFRSF1AP19438 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TNFRSF1AP19438 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
TNFRSF1AP19438 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TNFRSF1AP19438 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.76□□□□□ -1.97
TNFRSF1AP19438 MIR30E-201ENST00000362104 92 ntBASIC2.76□□□□□ -1.97
TNFRSF1AP19438 SNORD114-7-201ENST00000362520 77 ntBASIC2.76□□□□□ -1.97
TNFRSF1AP19438 RNY1P10-201ENST00000363268 113 ntBASIC2.76□□□□□ -1.97
TNFRSF1AP19438 SNORD56.5-201ENST00000364281 72 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms