RNA–Protein interactions for RNA: ENST00000262053.7

ATF1-201, Transcript of activating transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-201ENST00000262053 AEBP2Q6ZN18 517 aaPredicted RBP12.96□□□□□ -0.33
ATF1-201ENST00000262053 CHIC1Q5VXU3 224 aa12.37□□□□□ -0.43
ATF1-201ENST00000262053 SENP3Q9H4L4 574 aaPredicted RBP11.37□□□□□ -0.59
ATF1-201ENST00000262053 PHF23Q9BUL5 403 aaPredicted RBP11.03□□□□□ -0.64
ATF1-201ENST00000262053 POTEDQ86YR6 584 aa10.53□□□□□ -0.72
ATF1-201ENST00000262053 FOXD1Q16676 465 aa10.49□□□□□ -0.73
ATF1-201ENST00000262053 MSH5O43196 834 aa10.19□□□□□ -0.78
ATF1-201ENST00000262053 PIAS4Q8N2W9 510 aaPredicted RBP9.75□□□□□ -0.85
ATF1-201ENST00000262053 PLPPR3Q6T4P5 718 aa9.48□□□□□ -0.89
ATF1-201ENST00000262053 PPP6R1Q9UPN7 881 aa9.36□□□□□ -0.91
ATF1-201ENST00000262053 ADRA2BP18089 450 aa9.34□□□□□ -0.91
ATF1-201ENST00000262053 CACNB1Q02641 598 aaPredicted RBP8.93□□□□□ -0.98
ATF1-201ENST00000262053 DMRT2Q9Y5R5 561 aa8.9□□□□□ -0.98
ATF1-201ENST00000262053 SCAF1Q9H7N4 1312 aaKnown RBP8.84□□□□□ -0.99
ATF1-201ENST00000262053 MAPK8IP2Q13387 824 aaPredicted RBP8.67□□□□□ -1.02
ATF1-201ENST00000262053 RNF39Q9H2S5 420 aa8.55□□□□□ -1.04
ATF1-201ENST00000262053 DCAF8L1A6NGE4 600 aa8.5□□□□□ -1.05
ATF1-201ENST00000262053 C1QBPQ07021 282 aaKnown RBP8.49□□□□□ -1.05
ATF1-201ENST00000262053 HOXD11P31277 338 aaPredicted RBP8.39□□□□□ -1.07
ATF1-201ENST00000262053 DNAJC5BQ9UF47 199 aa8.37□□□□□ -1.07
ATF1-201ENST00000262053 RNF216Q9NWF9 866 aaPredicted RBP8.24□□□□□ -1.09
ATF1-201ENST00000262053 POTEHQ6S545 545 aa8.21□□□□□ -1.1
ATF1-201ENST00000262053 CNKSR2Q8WXI2 1034 aa8.21□□□□□ -1.1
ATF1-201ENST00000262053 PPP4R3CPQ6ZMV5 832 aa8.17□□□□□ -1.1
ATF1-201ENST00000262053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.01□□□□□ -1.13
ATF1-201ENST00000262053 NCBP3Q53F19 620 aaKnown RBP7.89□□□□□ -1.15
ATF1-201ENST00000262053 DSG3P32926 999 aa7.82□□□□□ -1.16
ATF1-201ENST00000262053 CAPN15O75808 1086 aa7.78□□□□□ -1.16
ATF1-201ENST00000262053 APLP2Q06481 763 aa7.76□□□□□ -1.17
ATF1-201ENST00000262053 U3KPZ7 1027 aaPredicted RBP7.7□□□□□ -1.18
ATF1-201ENST00000262053 RBM42Q9BTD8 480 aaKnown RBP7.66□□□□□ -1.18
ATF1-201ENST00000262053 SPINK5Q9NQ38 1064 aaPredicted RBP7.66□□□□□ -1.18
ATF1-201ENST00000262053 ZNF219Q9P2Y4 722 aaPredicted RBP7.63□□□□□ -1.19
ATF1-201ENST00000262053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.57□□□□□ -1.2
ATF1-201ENST00000262053 HNRNPUL2Q1KMD3 747 aaKnown RBP7.57□□□□□ -1.2
ATF1-201ENST00000262053 NPM3O75607 178 aaKnown RBP7.57□□□□□ -1.2
ATF1-201ENST00000262053 CHRDL2Q6WN34 429 aa7.53□□□□□ -1.2
ATF1-201ENST00000262053 TRHP20396 242 aaPredicted RBP7.52□□□□□ -1.21
ATF1-201ENST00000262053 SP7Q8TDD2 431 aaPredicted RBP7.51□□□□□ -1.21
ATF1-201ENST00000262053 ABCB7O75027 752 aa7.47□□□□□ -1.21
ATF1-201ENST00000262053 SAMD1Q6SPF0 538 aaPredicted RBP7.45□□□□□ -1.22
ATF1-201ENST00000262053 KCNA4P22459 653 aa7.34□□□□□ -1.23
ATF1-201ENST00000262053 AKT1S1Q96B36 256 aa7.32□□□□□ -1.24
ATF1-201ENST00000262053 SLC4A2P04920 1241 aa7.3□□□□□ -1.24
ATF1-201ENST00000262053 ZBTB12Q9Y330 459 aaPredicted RBP7.26□□□□□ -1.25
ATF1-201ENST00000262053 HAX1O00165 279 aa7.24□□□□□ -1.25
ATF1-201ENST00000262053 POLA2Q14181 598 aa7.21□□□□□ -1.26
ATF1-201ENST00000262053 PIP4P2Q8N4L2 257 aa7.21□□□□□ -1.26
ATF1-201ENST00000262053 PLSCR2Q9NRY7 297 aa7.21□□□□□ -1.26
ATF1-201ENST00000262053 REM2Q8IYK8 340 aaPredicted RBP7.16□□□□□ -1.26
ATF1-201ENST00000262053 MYCNP04198 464 aaPredicted RBP7.13□□□□□ -1.27
ATF1-201ENST00000262053 FXR2P51116 673 aaKnown RBP eCLIP7.13□□□□□ -1.27
ATF1-201ENST00000262053 PITPNM1O00562 1244 aa7.06□□□□□ -1.28
ATF1-201ENST00000262053 LHX8Q68G74 356 aa7.03□□□□□ -1.28
ATF1-201ENST00000262053 OSCARQ8IYS5 282 aa6.97□□□□□ -1.29
ATF1-201ENST00000262053 EVX2Q03828 476 aa6.93□□□□□ -1.3
ATF1-201ENST00000262053 SLC4A1APQ9BWU0 796 aaKnown RBP6.93□□□□□ -1.3
ATF1-201ENST00000262053 C19orf67A6NJJ6 358 aa6.93□□□□□ -1.3
ATF1-201ENST00000262053 CLCN6P51797 869 aa6.92□□□□□ -1.3
ATF1-201ENST00000262053 EHMT2Q96KQ7 1210 aa6.91□□□□□ -1.3
ATF1-201ENST00000262053 SPDYE2BA6NHP3 402 aa6.91□□□□□ -1.3
ATF1-201ENST00000262053 SPDYE6P0CI01 402 aa6.91□□□□□ -1.3
ATF1-201ENST00000262053 PRKAR2AP13861 404 aaKnown RBP6.91□□□□□ -1.3
ATF1-201ENST00000262053 SPDYE2Q495Y8 402 aa6.91□□□□□ -1.3
ATF1-201ENST00000262053 SPDYE1Q8NFV5 336 aaPredicted RBP6.91□□□□□ -1.3
ATF1-201ENST00000262053 GABBR2O75899 941 aa6.9□□□□□ -1.3
ATF1-201ENST00000262053 FBLN2P98095 1184 aa6.82□□□□□ -1.32
ATF1-201ENST00000262053 CLEC11AQ9Y240 323 aa6.79□□□□□ -1.32
ATF1-201ENST00000262053 ZBTB22O15209 634 aa6.79□□□□□ -1.32
ATF1-201ENST00000262053 FOXD4L1Q9NU39 408 aa6.78□□□□□ -1.32
ATF1-201ENST00000262053 ATF5Q9Y2D1 282 aaPredicted RBP6.76□□□□□ -1.33
ATF1-201ENST00000262053 CSRNP3Q8WYN3 585 aa6.75□□□□□ -1.33
ATF1-201ENST00000262053 PCDH10Q9P2E7 1040 aa6.75□□□□□ -1.33
ATF1-201ENST00000262053 ATXN8OSP0DMR3 200 aa6.72□□□□□ -1.33
ATF1-201ENST00000262053 DCBLD2Q96PD2 775 aa6.71□□□□□ -1.34
ATF1-201ENST00000262053 SSUH2Q9Y2M2 353 aa6.69□□□□□ -1.34
ATF1-201ENST00000262053 PRR29P0C7W0 189 aa6.68□□□□□ -1.34
ATF1-201ENST00000262053 ZNF692Q9BU19 519 aaPredicted RBP6.68□□□□□ -1.34
ATF1-201ENST00000262053 CD44P16070 742 aaKnown RBP6.67□□□□□ -1.34
ATF1-201ENST00000262053 POTEIP0CG38 1075 aa6.66□□□□□ -1.34
ATF1-201ENST00000262053 CHADLQ6NUI6 762 aa6.62□□□□□ -1.35
ATF1-201ENST00000262053 POTEMA6NI47 508 aa6.61□□□□□ -1.35
ATF1-201ENST00000262053 ZNF579Q8NAF0 562 aaKnown RBP6.59□□□□□ -1.35
ATF1-201ENST00000262053 FARP1Q9Y4F1 1045 aaPredicted RBP6.59□□□□□ -1.35
ATF1-201ENST00000262053 POTEGQ6S5H5 508 aa6.58□□□□□ -1.36
ATF1-201ENST00000262053 OTUD5Q96G74 571 aa6.54□□□□□ -1.36
ATF1-201ENST00000262053 MAMSTRQ6ZN01 415 aa6.54□□□□□ -1.36
ATF1-201ENST00000262053 PABPN1Q86U42 306 aaKnown RBP eCLIP6.52□□□□□ -1.36
ATF1-201ENST00000262053 ZRANB1Q9UGI0 708 aa6.51□□□□□ -1.37
ATF1-201ENST00000262053 PAK3O75914 559 aaPredicted RBP6.5□□□□□ -1.37
ATF1-201ENST00000262053 MKRN4PQ13434 485 aaPredicted RBP6.48□□□□□ -1.37
ATF1-201ENST00000262053 STAG3Q9UJ98 1225 aa6.44□□□□□ -1.38
ATF1-201ENST00000262053 C7P10643 843 aa6.42□□□□□ -1.38
ATF1-201ENST00000262053 SLC39A7Q92504 469 aa6.42□□□□□ -1.38
ATF1-201ENST00000262053 GALR2O43603 387 aaPredicted RBP6.41□□□□□ -1.38
ATF1-201ENST00000262053 SCUBE2Q9NQ36 999 aa6.41□□□□□ -1.38
ATF1-201ENST00000262053 POTEB2H3BUK9 544 aa6.39□□□□□ -1.39
ATF1-201ENST00000262053 NPM1P06748 294 aaKnown RBP eCLIP6.38□□□□□ -1.39
ATF1-201ENST00000262053 METRNQ9UJH8 293 aa6.37□□□□□ -1.39
ATF1-201ENST00000262053 ASTLQ6HA08 431 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms