RNA–Protein interactions for RNA: ENST00000517280.1

RNU1-104P-201, Transcript of RNA, U1 small nuclear 104, pseudogene, humanhuman

BASIC

Gene RNU1-104P, Length 175 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-104P-201ENST00000517280 AEBP2Q6ZN18 517 aaPredicted RBP13□□□□□ -0.33
RNU1-104P-201ENST00000517280 CHIC1Q5VXU3 224 aa12.12□□□□□ -0.47
RNU1-104P-201ENST00000517280 SENP3Q9H4L4 574 aaPredicted RBP11.02□□□□□ -0.65
RNU1-104P-201ENST00000517280 PHF23Q9BUL5 403 aaPredicted RBP10.85□□□□□ -0.67
RNU1-104P-201ENST00000517280 FOXD1Q16676 465 aa10.34□□□□□ -0.75
RNU1-104P-201ENST00000517280 POTEDQ86YR6 584 aa9.82□□□□□ -0.84
RNU1-104P-201ENST00000517280 MSH5O43196 834 aa9.69□□□□□ -0.86
RNU1-104P-201ENST00000517280 PIAS4Q8N2W9 510 aaPredicted RBP9.55□□□□□ -0.88
RNU1-104P-201ENST00000517280 PLPPR3Q6T4P5 718 aa9.54□□□□□ -0.88
RNU1-104P-201ENST00000517280 PPP6R1Q9UPN7 881 aa9.54□□□□□ -0.88
RNU1-104P-201ENST00000517280 ADRA2BP18089 450 aa9.44□□□□□ -0.9
RNU1-104P-201ENST00000517280 DMRT2Q9Y5R5 561 aa8.76□□□□□ -1.01
RNU1-104P-201ENST00000517280 MAPK8IP2Q13387 824 aaPredicted RBP8.73□□□□□ -1.01
RNU1-104P-201ENST00000517280 SCAF1Q9H7N4 1312 aaKnown RBP8.54□□□□□ -1.04
RNU1-104P-201ENST00000517280 HOXD11P31277 338 aaPredicted RBP8.38□□□□□ -1.07
RNU1-104P-201ENST00000517280 CACNB1Q02641 598 aaPredicted RBP8.36□□□□□ -1.07
RNU1-104P-201ENST00000517280 PPP4R3CPQ6ZMV5 832 aa8.35□□□□□ -1.07
RNU1-104P-201ENST00000517280 RNF39Q9H2S5 420 aa8.31□□□□□ -1.08
RNU1-104P-201ENST00000517280 DCAF8L1A6NGE4 600 aa8.3□□□□□ -1.08
RNU1-104P-201ENST00000517280 CNKSR2Q8WXI2 1034 aa8.23□□□□□ -1.09
RNU1-104P-201ENST00000517280 RNF216Q9NWF9 866 aaPredicted RBP8.22□□□□□ -1.09
RNU1-104P-201ENST00000517280 DNAJC5BQ9UF47 199 aa8.15□□□□□ -1.1
RNU1-104P-201ENST00000517280 C1QBPQ07021 282 aaKnown RBP8.13□□□□□ -1.11
RNU1-104P-201ENST00000517280 NPM3O75607 178 aaKnown RBP7.89□□□□□ -1.15
RNU1-104P-201ENST00000517280 NCBP3Q53F19 620 aaKnown RBP7.89□□□□□ -1.15
RNU1-104P-201ENST00000517280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.83□□□□□ -1.16
RNU1-104P-201ENST00000517280 U3KPZ7 1027 aaPredicted RBP7.78□□□□□ -1.16
RNU1-104P-201ENST00000517280 DSG3P32926 999 aa7.7□□□□□ -1.18
RNU1-104P-201ENST00000517280 SPINK5Q9NQ38 1064 aaPredicted RBP7.7□□□□□ -1.18
RNU1-104P-201ENST00000517280 SLC4A2P04920 1241 aa7.63□□□□□ -1.19
RNU1-104P-201ENST00000517280 POTEHQ6S545 545 aa7.62□□□□□ -1.19
RNU1-104P-201ENST00000517280 CAPN15O75808 1086 aa7.58□□□□□ -1.2
RNU1-104P-201ENST00000517280 KCNA4P22459 653 aa7.58□□□□□ -1.2
RNU1-104P-201ENST00000517280 ABCB7O75027 752 aa7.46□□□□□ -1.22
RNU1-104P-201ENST00000517280 ZNF219Q9P2Y4 722 aaPredicted RBP7.45□□□□□ -1.22
RNU1-104P-201ENST00000517280 TRHP20396 242 aaPredicted RBP7.44□□□□□ -1.22
RNU1-104P-201ENST00000517280 APLP2Q06481 763 aa7.4□□□□□ -1.22
RNU1-104P-201ENST00000517280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.38□□□□□ -1.23
RNU1-104P-201ENST00000517280 HNRNPUL2Q1KMD3 747 aaKnown RBP7.38□□□□□ -1.23
RNU1-104P-201ENST00000517280 SAMD1Q6SPF0 538 aaPredicted RBP7.36□□□□□ -1.23
RNU1-104P-201ENST00000517280 RBM42Q9BTD8 480 aaKnown RBP7.28□□□□□ -1.24
RNU1-104P-201ENST00000517280 MYCNP04198 464 aaPredicted RBP7.27□□□□□ -1.25
RNU1-104P-201ENST00000517280 CHRDL2Q6WN34 429 aa7.23□□□□□ -1.25
RNU1-104P-201ENST00000517280 POLA2Q14181 598 aa7.22□□□□□ -1.25
RNU1-104P-201ENST00000517280 ATF5Q9Y2D1 282 aaPredicted RBP7.18□□□□□ -1.26
RNU1-104P-201ENST00000517280 AKT1S1Q96B36 256 aa7.11□□□□□ -1.27
RNU1-104P-201ENST00000517280 FOXD4L1Q9NU39 408 aa7.1□□□□□ -1.27
RNU1-104P-201ENST00000517280 SP7Q8TDD2 431 aaPredicted RBP7.06□□□□□ -1.28
RNU1-104P-201ENST00000517280 ZBTB12Q9Y330 459 aaPredicted RBP7.06□□□□□ -1.28
RNU1-104P-201ENST00000517280 OSCARQ8IYS5 282 aa7.05□□□□□ -1.28
RNU1-104P-201ENST00000517280 SLC4A1APQ9BWU0 796 aaKnown RBP7.05□□□□□ -1.28
RNU1-104P-201ENST00000517280 ZBTB22O15209 634 aa7.04□□□□□ -1.28
RNU1-104P-201ENST00000517280 REM2Q8IYK8 340 aaPredicted RBP7.04□□□□□ -1.28
RNU1-104P-201ENST00000517280 PIP4P2Q8N4L2 257 aa7.04□□□□□ -1.28
RNU1-104P-201ENST00000517280 PITPNM1O00562 1244 aa7□□□□□ -1.29
RNU1-104P-201ENST00000517280 FXR2P51116 673 aaKnown RBP eCLIP6.99□□□□□ -1.29
RNU1-104P-201ENST00000517280 ATXN8OSP0DMR3 200 aa6.91□□□□□ -1.3
RNU1-104P-201ENST00000517280 EVX2Q03828 476 aa6.89□□□□□ -1.31
RNU1-104P-201ENST00000517280 SPDYE2BA6NHP3 402 aa6.86□□□□□ -1.31
RNU1-104P-201ENST00000517280 SPDYE6P0CI01 402 aa6.86□□□□□ -1.31
RNU1-104P-201ENST00000517280 SPDYE2Q495Y8 402 aa6.86□□□□□ -1.31
RNU1-104P-201ENST00000517280 HAX1O00165 279 aa6.85□□□□□ -1.31
RNU1-104P-201ENST00000517280 MKRN4PQ13434 485 aaPredicted RBP6.85□□□□□ -1.31
RNU1-104P-201ENST00000517280 SSUH2Q9Y2M2 353 aa6.82□□□□□ -1.32
RNU1-104P-201ENST00000517280 C19orf67A6NJJ6 358 aa6.77□□□□□ -1.33
RNU1-104P-201ENST00000517280 PRKAR2AP13861 404 aaKnown RBP6.76□□□□□ -1.33
RNU1-104P-201ENST00000517280 FBLN2P98095 1184 aa6.76□□□□□ -1.33
RNU1-104P-201ENST00000517280 SPDYE1Q8NFV5 336 aaPredicted RBP6.75□□□□□ -1.33
RNU1-104P-201ENST00000517280 CLEC11AQ9Y240 323 aa6.74□□□□□ -1.33
RNU1-104P-201ENST00000517280 ZNF692Q9BU19 519 aaPredicted RBP6.68□□□□□ -1.34
RNU1-104P-201ENST00000517280 GABBR2O75899 941 aa6.67□□□□□ -1.34
RNU1-104P-201ENST00000517280 CHADLQ6NUI6 762 aa6.67□□□□□ -1.34
RNU1-104P-201ENST00000517280 POTEIP0CG38 1075 aa6.61□□□□□ -1.35
RNU1-104P-201ENST00000517280 PABPN1Q86U42 306 aaKnown RBP eCLIP6.61□□□□□ -1.35
RNU1-104P-201ENST00000517280 LHX8Q68G74 356 aa6.58□□□□□ -1.36
RNU1-104P-201ENST00000517280 PRR29P0C7W0 189 aa6.56□□□□□ -1.36
RNU1-104P-201ENST00000517280 FARP1Q9Y4F1 1045 aaPredicted RBP6.54□□□□□ -1.36
RNU1-104P-201ENST00000517280 CD44P16070 742 aaKnown RBP6.53□□□□□ -1.36
RNU1-104P-201ENST00000517280 ZNF579Q8NAF0 562 aaKnown RBP6.5□□□□□ -1.37
RNU1-104P-201ENST00000517280 CLCN6P51797 869 aa6.48□□□□□ -1.37
RNU1-104P-201ENST00000517280 CSRNP3Q8WYN3 585 aa6.48□□□□□ -1.37
RNU1-104P-201ENST00000517280 CREBZFQ9NS37 354 aa6.47□□□□□ -1.37
RNU1-104P-201ENST00000517280 GALR2O43603 387 aaPredicted RBP6.4□□□□□ -1.38
RNU1-104P-201ENST00000517280 MNX1P50219 401 aaPredicted RBP6.4□□□□□ -1.38
RNU1-104P-201ENST00000517280 POTEB2H3BUK9 544 aa6.38□□□□□ -1.39
RNU1-104P-201ENST00000517280 ZRANB1Q9UGI0 708 aa6.38□□□□□ -1.39
RNU1-104P-201ENST00000517280 OTUD5Q96G74 571 aa6.36□□□□□ -1.39
RNU1-104P-201ENST00000517280 DCBLD2Q96PD2 775 aa6.36□□□□□ -1.39
RNU1-104P-201ENST00000517280 STAG3Q9UJ98 1225 aa6.35□□□□□ -1.39
RNU1-104P-201ENST00000517280 PHF12Q96QT6 1004 aa6.34□□□□□ -1.39
RNU1-104P-201ENST00000517280 SPDYE4A6NLX3 237 aa6.33□□□□□ -1.4
RNU1-104P-201ENST00000517280 PELP1Q8IZL8 1130 aaKnown RBP6.32□□□□□ -1.4
RNU1-104P-201ENST00000517280 PLSCR2Q9NRY7 297 aa6.32□□□□□ -1.4
RNU1-104P-201ENST00000517280 PROM2Q8N271 834 aa6.31□□□□□ -1.4
RNU1-104P-201ENST00000517280 ASTLQ6HA08 431 aaPredicted RBP6.29□□□□□ -1.4
RNU1-104P-201ENST00000517280 EHMT2Q96KQ7 1210 aa6.29□□□□□ -1.4
RNU1-104P-201ENST00000517280 POTEJP0CG39 1038 aa6.28□□□□□ -1.4
RNU1-104P-201ENST00000517280 MS4A3Q96HJ5 214 aa6.27□□□□□ -1.41
RNU1-104P-201ENST00000517280 ATMINO43313 823 aaPredicted RBP6.24□□□□□ -1.41
RNU1-104P-201ENST00000517280 PAK3O75914 559 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms