RNA–Protein interactions for RNA: ENST00000618249.1

MALAT1.1-201, metastasis associated lung adenocarcinoma transcript 1, humanhuman

BASIC

Gene MALAT1, Length 95 nt, Biotype misc RNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1.1-201ENST00000618249 AEBP2Q6ZN18 517 aaPredicted RBP13.59□□□□□ -0.23
MALAT1.1-201ENST00000618249 CHIC1Q5VXU3 224 aa12.73□□□□□ -0.37
MALAT1.1-201ENST00000618249 SENP3Q9H4L4 574 aaPredicted RBP11.74□□□□□ -0.53
MALAT1.1-201ENST00000618249 POTEDQ86YR6 584 aa11.47□□□□□ -0.57
MALAT1.1-201ENST00000618249 PHF23Q9BUL5 403 aaPredicted RBP11.46□□□□□ -0.57
MALAT1.1-201ENST00000618249 FOXD1Q16676 465 aa11□□□□□ -0.65
MALAT1.1-201ENST00000618249 MSH5O43196 834 aa10.58□□□□□ -0.72
MALAT1.1-201ENST00000618249 PIAS4Q8N2W9 510 aaPredicted RBP10.15□□□□□ -0.78
MALAT1.1-201ENST00000618249 PPP6R1Q9UPN7 881 aa9.74□□□□□ -0.85
MALAT1.1-201ENST00000618249 ADRA2BP18089 450 aa9.68□□□□□ -0.86
MALAT1.1-201ENST00000618249 PLPPR3Q6T4P5 718 aa9.51□□□□□ -0.89
MALAT1.1-201ENST00000618249 CACNB1Q02641 598 aaPredicted RBP9.48□□□□□ -0.89
MALAT1.1-201ENST00000618249 DMRT2Q9Y5R5 561 aa9.2□□□□□ -0.94
MALAT1.1-201ENST00000618249 MAPK8IP2Q13387 824 aaPredicted RBP9.08□□□□□ -0.96
MALAT1.1-201ENST00000618249 RNF39Q9H2S5 420 aa8.96□□□□□ -0.98
MALAT1.1-201ENST00000618249 SCAF1Q9H7N4 1312 aaKnown RBP8.89□□□□□ -0.99
MALAT1.1-201ENST00000618249 DCAF8L1A6NGE4 600 aa8.86□□□□□ -0.99
MALAT1.1-201ENST00000618249 POTEHQ6S545 545 aa8.86□□□□□ -0.99
MALAT1.1-201ENST00000618249 C1QBPQ07021 282 aaKnown RBP8.79□□□□□ -1
MALAT1.1-201ENST00000618249 HOXD11P31277 338 aaPredicted RBP8.58□□□□□ -1.04
MALAT1.1-201ENST00000618249 DNAJC5BQ9UF47 199 aa8.42□□□□□ -1.06
MALAT1.1-201ENST00000618249 RNF216Q9NWF9 866 aaPredicted RBP8.34□□□□□ -1.07
MALAT1.1-201ENST00000618249 CNKSR2Q8WXI2 1034 aa8.24□□□□□ -1.09
MALAT1.1-201ENST00000618249 PPP4R3CPQ6ZMV5 832 aa8.23□□□□□ -1.09
MALAT1.1-201ENST00000618249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.18□□□□□ -1.1
MALAT1.1-201ENST00000618249 DSG3P32926 999 aa8.15□□□□□ -1.1
MALAT1.1-201ENST00000618249 CAPN15O75808 1086 aa8.05□□□□□ -1.12
MALAT1.1-201ENST00000618249 SPINK5Q9NQ38 1064 aaPredicted RBP8.02□□□□□ -1.13
MALAT1.1-201ENST00000618249 SP7Q8TDD2 431 aaPredicted RBP7.99□□□□□ -1.13
MALAT1.1-201ENST00000618249 U3KPZ7 1027 aaPredicted RBP7.93□□□□□ -1.14
MALAT1.1-201ENST00000618249 CHRDL2Q6WN34 429 aa7.91□□□□□ -1.14
MALAT1.1-201ENST00000618249 RBM42Q9BTD8 480 aaKnown RBP7.82□□□□□ -1.16
MALAT1.1-201ENST00000618249 ABCB7O75027 752 aa7.8□□□□□ -1.16
MALAT1.1-201ENST00000618249 TRHP20396 242 aaPredicted RBP7.75□□□□□ -1.17
MALAT1.1-201ENST00000618249 NCBP3Q53F19 620 aaKnown RBP7.72□□□□□ -1.17
MALAT1.1-201ENST00000618249 ZNF219Q9P2Y4 722 aaPredicted RBP7.72□□□□□ -1.17
MALAT1.1-201ENST00000618249 APLP2Q06481 763 aa7.67□□□□□ -1.18
MALAT1.1-201ENST00000618249 HAX1O00165 279 aa7.62□□□□□ -1.19
MALAT1.1-201ENST00000618249 NPM3O75607 178 aaKnown RBP7.6□□□□□ -1.19
MALAT1.1-201ENST00000618249 PLSCR2Q9NRY7 297 aa7.59□□□□□ -1.19
MALAT1.1-201ENST00000618249 PIP4P2Q8N4L2 257 aa7.57□□□□□ -1.2
MALAT1.1-201ENST00000618249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.49□□□□□ -1.21
MALAT1.1-201ENST00000618249 HNRNPUL2Q1KMD3 747 aaKnown RBP7.49□□□□□ -1.21
MALAT1.1-201ENST00000618249 LHX8Q68G74 356 aa7.47□□□□□ -1.21
MALAT1.1-201ENST00000618249 AKT1S1Q96B36 256 aa7.47□□□□□ -1.21
MALAT1.1-201ENST00000618249 EVX2Q03828 476 aa7.44□□□□□ -1.22
MALAT1.1-201ENST00000618249 SLC4A2P04920 1241 aa7.42□□□□□ -1.22
MALAT1.1-201ENST00000618249 SAMD1Q6SPF0 538 aaPredicted RBP7.41□□□□□ -1.22
MALAT1.1-201ENST00000618249 FXR2P51116 673 aaKnown RBP eCLIP7.4□□□□□ -1.22
MALAT1.1-201ENST00000618249 REM2Q8IYK8 340 aaPredicted RBP7.4□□□□□ -1.22
MALAT1.1-201ENST00000618249 POLA2Q14181 598 aa7.39□□□□□ -1.23
MALAT1.1-201ENST00000618249 PITPNM1O00562 1244 aa7.35□□□□□ -1.23
MALAT1.1-201ENST00000618249 GABBR2O75899 941 aa7.25□□□□□ -1.25
MALAT1.1-201ENST00000618249 ZBTB12Q9Y330 459 aaPredicted RBP7.21□□□□□ -1.26
MALAT1.1-201ENST00000618249 C19orf67A6NJJ6 358 aa7.2□□□□□ -1.26
MALAT1.1-201ENST00000618249 OSCARQ8IYS5 282 aa7.2□□□□□ -1.26
MALAT1.1-201ENST00000618249 PRKAR2AP13861 404 aaKnown RBP7.15□□□□□ -1.26
MALAT1.1-201ENST00000618249 POTEMA6NI47 508 aa7.09□□□□□ -1.27
MALAT1.1-201ENST00000618249 POTEIP0CG38 1075 aa7.08□□□□□ -1.28
MALAT1.1-201ENST00000618249 MYCNP04198 464 aaPredicted RBP7.06□□□□□ -1.28
MALAT1.1-201ENST00000618249 POTEGQ6S5H5 508 aa7.04□□□□□ -1.28
MALAT1.1-201ENST00000618249 PCDH10Q9P2E7 1040 aa7□□□□□ -1.29
MALAT1.1-201ENST00000618249 CLEC11AQ9Y240 323 aa6.98□□□□□ -1.29
MALAT1.1-201ENST00000618249 SPDYE1Q8NFV5 336 aaPredicted RBP6.96□□□□□ -1.3
MALAT1.1-201ENST00000618249 OTUD5Q96G74 571 aa6.96□□□□□ -1.3
MALAT1.1-201ENST00000618249 DCBLD2Q96PD2 775 aa6.94□□□□□ -1.3
MALAT1.1-201ENST00000618249 ATF5Q9Y2D1 282 aaPredicted RBP6.93□□□□□ -1.3
MALAT1.1-201ENST00000618249 CLCN6P51797 869 aa6.92□□□□□ -1.3
MALAT1.1-201ENST00000618249 SPDYE2BA6NHP3 402 aa6.91□□□□□ -1.3
MALAT1.1-201ENST00000618249 SPDYE6P0CI01 402 aa6.91□□□□□ -1.3
MALAT1.1-201ENST00000618249 SPDYE2Q495Y8 402 aa6.91□□□□□ -1.3
MALAT1.1-201ENST00000618249 CHADLQ6NUI6 762 aa6.91□□□□□ -1.3
MALAT1.1-201ENST00000618249 CD44P16070 742 aaKnown RBP6.89□□□□□ -1.31
MALAT1.1-201ENST00000618249 KCNA4P22459 653 aa6.85□□□□□ -1.31
MALAT1.1-201ENST00000618249 POTEB2H3BUK9 544 aa6.84□□□□□ -1.31
MALAT1.1-201ENST00000618249 PRR29P0C7W0 189 aa6.76□□□□□ -1.33
MALAT1.1-201ENST00000618249 LCE2DQ5TA82 110 aaPredicted RBP6.74□□□□□ -1.33
MALAT1.1-201ENST00000618249 ZNF579Q8NAF0 562 aaKnown RBP6.74□□□□□ -1.33
MALAT1.1-201ENST00000618249 SSUH2Q9Y2M2 353 aa6.74□□□□□ -1.33
MALAT1.1-201ENST00000618249 FARP1Q9Y4F1 1045 aaPredicted RBP6.74□□□□□ -1.33
MALAT1.1-201ENST00000618249 FBLN2P98095 1184 aa6.73□□□□□ -1.33
MALAT1.1-201ENST00000618249 GALR2O43603 387 aaPredicted RBP6.71□□□□□ -1.34
MALAT1.1-201ENST00000618249 ZNF692Q9BU19 519 aaPredicted RBP6.71□□□□□ -1.34
MALAT1.1-201ENST00000618249 FAM163AQ96GL9 167 aaPredicted RBP6.69□□□□□ -1.34
MALAT1.1-201ENST00000618249 ZRANB1Q9UGI0 708 aa6.67□□□□□ -1.34
MALAT1.1-201ENST00000618249 MAMSTRQ6ZN01 415 aa6.65□□□□□ -1.34
MALAT1.1-201ENST00000618249 POTEJP0CG39 1038 aa6.63□□□□□ -1.35
MALAT1.1-201ENST00000618249 CDAN1Q8IWY9 1227 aa6.63□□□□□ -1.35
MALAT1.1-201ENST00000618249 PELP1Q8IZL8 1130 aaKnown RBP6.61□□□□□ -1.35
MALAT1.1-201ENST00000618249 FOXD4L1Q9NU39 408 aa6.61□□□□□ -1.35
MALAT1.1-201ENST00000618249 METRNQ9UJH8 293 aa6.61□□□□□ -1.35
MALAT1.1-201ENST00000618249 PABPN1Q86U42 306 aaKnown RBP eCLIP6.6□□□□□ -1.35
MALAT1.1-201ENST00000618249 SCUBE2Q9NQ36 999 aa6.58□□□□□ -1.36
MALAT1.1-201ENST00000618249 MKRN4PQ13434 485 aaPredicted RBP6.57□□□□□ -1.36
MALAT1.1-201ENST00000618249 C7P10643 843 aa6.56□□□□□ -1.36
MALAT1.1-201ENST00000618249 SLC39A7Q92504 469 aa6.56□□□□□ -1.36
MALAT1.1-201ENST00000618249 MMRN1Q13201 1228 aa6.55□□□□□ -1.36
MALAT1.1-201ENST00000618249 ASTLQ6HA08 431 aaPredicted RBP6.52□□□□□ -1.37
MALAT1.1-201ENST00000618249 PHF12Q96QT6 1004 aa6.52□□□□□ -1.37
MALAT1.1-201ENST00000618249 PAK3O75914 559 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms