RNA–Protein interactions for RNA: ENST00000337777.7

PLS1-201, Transcript of plastin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLS1, Length 3,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-201ENST00000337777 CHIC1Q5VXU3 224 aa9.39□□□□□ -0.91
PLS1-201ENST00000337777 AEBP2Q6ZN18 517 aaPredicted RBP9.09□□□□□ -0.96
PLS1-201ENST00000337777 PHF23Q9BUL5 403 aaPredicted RBP8.28□□□□□ -1.08
PLS1-201ENST00000337777 PLPPR3Q6T4P5 718 aa7.8□□□□□ -1.16
PLS1-201ENST00000337777 SENP3Q9H4L4 574 aaPredicted RBP7.66□□□□□ -1.18
PLS1-201ENST00000337777 KCNA4P22459 653 aa7.23□□□□□ -1.25
PLS1-201ENST00000337777 ADRA2BP18089 450 aa7.19□□□□□ -1.26
PLS1-201ENST00000337777 EHMT2Q96KQ7 1210 aa7.17□□□□□ -1.26
PLS1-201ENST00000337777 PPP6R1Q9UPN7 881 aa7.08□□□□□ -1.28
PLS1-201ENST00000337777 NISCHQ9Y2I1 1504 aa7.07□□□□□ -1.28
PLS1-201ENST00000337777 CSRNP3Q8WYN3 585 aa7.04□□□□□ -1.28
PLS1-201ENST00000337777 FOXD1Q16676 465 aa7.02□□□□□ -1.29
PLS1-201ENST00000337777 SLC4A1APQ9BWU0 796 aaKnown RBP6.97□□□□□ -1.29
PLS1-201ENST00000337777 PPP4R3CPQ6ZMV5 832 aa6.9□□□□□ -1.3
PLS1-201ENST00000337777 NCBP3Q53F19 620 aaKnown RBP6.88□□□□□ -1.31
PLS1-201ENST00000337777 DNAJC5BQ9UF47 199 aa6.79□□□□□ -1.32
PLS1-201ENST00000337777 NPM3O75607 178 aaKnown RBP6.77□□□□□ -1.33
PLS1-201ENST00000337777 ZBTB22O15209 634 aa6.7□□□□□ -1.34
PLS1-201ENST00000337777 SLC24A1O60721 1099 aa6.68□□□□□ -1.34
PLS1-201ENST00000337777 PIAS4Q8N2W9 510 aaPredicted RBP6.66□□□□□ -1.34
PLS1-201ENST00000337777 CNKSR2Q8WXI2 1034 aa6.66□□□□□ -1.34
PLS1-201ENST00000337777 AMER1Q5JTC6 1135 aaPredicted RBP6.63□□□□□ -1.35
PLS1-201ENST00000337777 FOXD4L1Q9NU39 408 aa6.58□□□□□ -1.36
PLS1-201ENST00000337777 SCAF1Q9H7N4 1312 aaKnown RBP6.54□□□□□ -1.36
PLS1-201ENST00000337777 RTN4Q9NQC3 1192 aaKnown RBP6.53□□□□□ -1.36
PLS1-201ENST00000337777 CCDC180Q9P1Z9 1646 aa6.48□□□□□ -1.37
PLS1-201ENST00000337777 RNF216Q9NWF9 866 aaPredicted RBP6.44□□□□□ -1.38
PLS1-201ENST00000337777 ATXN8OSP0DMR3 200 aa6.42□□□□□ -1.38
PLS1-201ENST00000337777 MSH5O43196 834 aa6.34□□□□□ -1.39
PLS1-201ENST00000337777 HOXD11P31277 338 aaPredicted RBP6.32□□□□□ -1.4
PLS1-201ENST00000337777 POTEDQ86YR6 584 aa6.31□□□□□ -1.4
PLS1-201ENST00000337777 SLC4A2P04920 1241 aa6.3□□□□□ -1.4
PLS1-201ENST00000337777 MYCNP04198 464 aaPredicted RBP6.27□□□□□ -1.41
PLS1-201ENST00000337777 MAPK8IP2Q13387 824 aaPredicted RBP6.26□□□□□ -1.41
PLS1-201ENST00000337777 FKBP8Q14318 412 aa6.25□□□□□ -1.41
PLS1-201ENST00000337777 DMRT2Q9Y5R5 561 aa6.23□□□□□ -1.41
PLS1-201ENST00000337777 ABCC9O60706 1549 aa6.17□□□□□ -1.42
PLS1-201ENST00000337777 MYO15BQ96JP2 1530 aa6.14□□□□□ -1.43
PLS1-201ENST00000337777 NACADO15069 1562 aa6.08□□□□□ -1.44
PLS1-201ENST00000337777 RB1CC1Q8TDY2 1594 aa6.07□□□□□ -1.44
PLS1-201ENST00000337777 PLCB2Q00722 1185 aa6.06□□□□□ -1.44
PLS1-201ENST00000337777 PROM2Q8N271 834 aa6.03□□□□□ -1.44
PLS1-201ENST00000337777 DCAF1Q9Y4B6 1507 aa6.01□□□□□ -1.45
PLS1-201ENST00000337777 SHROOM4Q9ULL8 1493 aa6.01□□□□□ -1.45
PLS1-201ENST00000337777 ATF5Q9Y2D1 282 aaPredicted RBP6.01□□□□□ -1.45
PLS1-201ENST00000337777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.01□□□□□ -1.45
PLS1-201ENST00000337777 HNRNPUL2Q1KMD3 747 aaKnown RBP6.01□□□□□ -1.45
PLS1-201ENST00000337777 FBXO3Q9UK99 471 aa6□□□□□ -1.45
PLS1-201ENST00000337777 SAMD1Q6SPF0 538 aaPredicted RBP5.99□□□□□ -1.45
PLS1-201ENST00000337777 UNC13AQ9UPW8 1703 aa5.96□□□□□ -1.45
PLS1-201ENST00000337777 BCANQ96GW7 911 aa5.95□□□□□ -1.46
PLS1-201ENST00000337777 VSIG10Q8N0Z9 540 aa5.95□□□□□ -1.46
PLS1-201ENST00000337777 BICRAQ9NZM4 1560 aa5.93□□□□□ -1.46
PLS1-201ENST00000337777 U3KPZ7 1027 aaPredicted RBP5.89□□□□□ -1.47
PLS1-201ENST00000337777 ZNF219Q9P2Y4 722 aaPredicted RBP5.88□□□□□ -1.47
PLS1-201ENST00000337777 ZCCHC6Q5VYS8 1495 aaKnown RBP5.88□□□□□ -1.47
PLS1-201ENST00000337777 VASPP50552 380 aaPredicted RBP5.88□□□□□ -1.47
PLS1-201ENST00000337777 TAOK2Q9UL54 1235 aa5.88□□□□□ -1.47
PLS1-201ENST00000337777 SPDYE4A6NLX3 237 aa5.86□□□□□ -1.47
PLS1-201ENST00000337777 HAP1P54257 671 aaPredicted RBP5.86□□□□□ -1.47
PLS1-201ENST00000337777 APLP2Q06481 763 aa5.85□□□□□ -1.47
PLS1-201ENST00000337777 PKD2Q13563 968 aa5.84□□□□□ -1.47
PLS1-201ENST00000337777 IFNLR1Q8IU57 520 aaPredicted RBP5.84□□□□□ -1.48
PLS1-201ENST00000337777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.84□□□□□ -1.48
PLS1-201ENST00000337777 MKRN4PQ13434 485 aaPredicted RBP5.82□□□□□ -1.48
PLS1-201ENST00000337777 BBXQ8WY36 941 aaPredicted RBP5.82□□□□□ -1.48
PLS1-201ENST00000337777 PRKCSHP14314 528 aaPredicted RBP5.79□□□□□ -1.48
PLS1-201ENST00000337777 DNAJC5Q9H3Z4 198 aa5.77□□□□□ -1.49
PLS1-201ENST00000337777 KDM2AQ9Y2K7 1162 aa5.77□□□□□ -1.49
PLS1-201ENST00000337777 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.73□□□□□ -1.49
PLS1-201ENST00000337777 EIF4G1Q04637 1599 aaKnown RBP5.73□□□□□ -1.49
PLS1-201ENST00000337777 FBLN2P98095 1184 aa5.72□□□□□ -1.49
PLS1-201ENST00000337777 CC2D2AQ9P2K1 1620 aa5.72□□□□□ -1.49
PLS1-201ENST00000337777 TPRNQ4KMQ1 711 aa5.71□□□□□ -1.5
PLS1-201ENST00000337777 NPM1P06748 294 aaKnown RBP eCLIP5.7□□□□□ -1.5
PLS1-201ENST00000337777 SPOCK2Q92563 424 aa5.7□□□□□ -1.5
PLS1-201ENST00000337777 DCAF8L2P0C7V8 631 aa5.66□□□□□ -1.5
PLS1-201ENST00000337777 STAG3Q9UJ98 1225 aa5.65□□□□□ -1.5
PLS1-201ENST00000337777 DCAF8L1A6NGE4 600 aa5.65□□□□□ -1.5
PLS1-201ENST00000337777 CECR2Q9BXF3 1484 aa5.65□□□□□ -1.51
PLS1-201ENST00000337777 ECM2O94769 699 aaPredicted RBP5.65□□□□□ -1.51
PLS1-201ENST00000337777 PAXIP1Q6ZW49 1069 aaPredicted RBP5.65□□□□□ -1.51
PLS1-201ENST00000337777 PABPN1Q86U42 306 aaKnown RBP eCLIP5.65□□□□□ -1.51
PLS1-201ENST00000337777 SCRIBQ14160 1630 aa5.64□□□□□ -1.51
PLS1-201ENST00000337777 SPRYD3Q8NCJ5 442 aa5.63□□□□□ -1.51
PLS1-201ENST00000337777 ERICH6Q7L0X2 663 aa5.63□□□□□ -1.51
PLS1-201ENST00000337777 ZBTB12Q9Y330 459 aaPredicted RBP5.63□□□□□ -1.51
PLS1-201ENST00000337777 PEG3Q9GZU2 1588 aa5.61□□□□□ -1.51
PLS1-201ENST00000337777 NCAPD3P42695 1498 aa5.6□□□□□ -1.51
PLS1-201ENST00000337777 RGL2O15211 777 aa5.6□□□□□ -1.51
PLS1-201ENST00000337777 TRIM41Q8WV44 630 aa5.59□□□□□ -1.51
PLS1-201ENST00000337777 TSHZ2Q9NRE2 1034 aa5.59□□□□□ -1.51
PLS1-201ENST00000337777 HMGXB3Q12766 1538 aa5.59□□□□□ -1.52
PLS1-201ENST00000337777 CFAP44Q96MT7 982 aa5.58□□□□□ -1.52
PLS1-201ENST00000337777 HS6ST3Q8IZP7 471 aa5.57□□□□□ -1.52
PLS1-201ENST00000337777 ARXQ96QS3 562 aa5.57□□□□□ -1.52
PLS1-201ENST00000337777 POLA2Q14181 598 aa5.56□□□□□ -1.52
PLS1-201ENST00000337777 CUX2O14529 1486 aa5.56□□□□□ -1.52
PLS1-201ENST00000337777 SSUH2Q9Y2M2 353 aa5.55□□□□□ -1.52
PLS1-201ENST00000337777 KLHL34Q8N239 644 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms