RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 AEBP2Q6ZN18 517 aaPredicted RBP14.28□□□□□ -0.12
RNU6-228P-201ENST00000362700 CHIC1Q5VXU3 224 aa13.44□□□□□ -0.26
RNU6-228P-201ENST00000362700 POTEDQ86YR6 584 aa12.88□□□□□ -0.35
RNU6-228P-201ENST00000362700 SENP3Q9H4L4 574 aaPredicted RBP12.45□□□□□ -0.42
RNU6-228P-201ENST00000362700 PHF23Q9BUL5 403 aaPredicted RBP12.09□□□□□ -0.47
RNU6-228P-201ENST00000362700 FOXD1Q16676 465 aa11.67□□□□□ -0.54
RNU6-228P-201ENST00000362700 MSH5O43196 834 aa11.41□□□□□ -0.58
RNU6-228P-201ENST00000362700 PIAS4Q8N2W9 510 aaPredicted RBP10.71□□□□□ -0.69
RNU6-228P-201ENST00000362700 CACNB1Q02641 598 aaPredicted RBP10.45□□□□□ -0.74
RNU6-228P-201ENST00000362700 PPP6R1Q9UPN7 881 aa10.05□□□□□ -0.8
RNU6-228P-201ENST00000362700 ADRA2BP18089 450 aa9.99□□□□□ -0.81
RNU6-228P-201ENST00000362700 POTEHQ6S545 545 aa9.91□□□□□ -0.82
RNU6-228P-201ENST00000362700 DMRT2Q9Y5R5 561 aa9.67□□□□□ -0.86
RNU6-228P-201ENST00000362700 PLPPR3Q6T4P5 718 aa9.62□□□□□ -0.87
RNU6-228P-201ENST00000362700 RNF39Q9H2S5 420 aa9.59□□□□□ -0.87
RNU6-228P-201ENST00000362700 MAPK8IP2Q13387 824 aaPredicted RBP9.48□□□□□ -0.89
RNU6-228P-201ENST00000362700 DCAF8L1A6NGE4 600 aa9.42□□□□□ -0.9
RNU6-228P-201ENST00000362700 C1QBPQ07021 282 aaKnown RBP9.42□□□□□ -0.9
RNU6-228P-201ENST00000362700 SCAF1Q9H7N4 1312 aaKnown RBP9.26□□□□□ -0.93
RNU6-228P-201ENST00000362700 HOXD11P31277 338 aaPredicted RBP8.89□□□□□ -0.99
RNU6-228P-201ENST00000362700 DNAJC5BQ9UF47 199 aa8.81□□□□□ -1
RNU6-228P-201ENST00000362700 SP7Q8TDD2 431 aaPredicted RBP8.79□□□□□ -1
RNU6-228P-201ENST00000362700 PLSCR2Q9NRY7 297 aa8.68□□□□□ -1.02
RNU6-228P-201ENST00000362700 DSG3P32926 999 aa8.61□□□□□ -1.03
RNU6-228P-201ENST00000362700 RNF216Q9NWF9 866 aaPredicted RBP8.56□□□□□ -1.04
RNU6-228P-201ENST00000362700 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.54□□□□□ -1.04
RNU6-228P-201ENST00000362700 CHRDL2Q6WN34 429 aa8.53□□□□□ -1.04
RNU6-228P-201ENST00000362700 CAPN15O75808 1086 aa8.48□□□□□ -1.05
RNU6-228P-201ENST00000362700 CNKSR2Q8WXI2 1034 aa8.37□□□□□ -1.07
RNU6-228P-201ENST00000362700 SPINK5Q9NQ38 1064 aaPredicted RBP8.37□□□□□ -1.07
RNU6-228P-201ENST00000362700 RBM42Q9BTD8 480 aaKnown RBP8.34□□□□□ -1.07
RNU6-228P-201ENST00000362700 HAX1O00165 279 aa8.27□□□□□ -1.09
RNU6-228P-201ENST00000362700 PPP4R3CPQ6ZMV5 832 aa8.26□□□□□ -1.09
RNU6-228P-201ENST00000362700 LHX8Q68G74 356 aa8.24□□□□□ -1.09
RNU6-228P-201ENST00000362700 U3KPZ7 1027 aaPredicted RBP8.17□□□□□ -1.1
RNU6-228P-201ENST00000362700 ABCB7O75027 752 aa8.15□□□□□ -1.1
RNU6-228P-201ENST00000362700 TRHP20396 242 aaPredicted RBP8.08□□□□□ -1.12
RNU6-228P-201ENST00000362700 PIP4P2Q8N4L2 257 aa8.06□□□□□ -1.12
RNU6-228P-201ENST00000362700 ZNF219Q9P2Y4 722 aaPredicted RBP8.04□□□□□ -1.12
RNU6-228P-201ENST00000362700 EVX2Q03828 476 aa7.97□□□□□ -1.13
RNU6-228P-201ENST00000362700 APLP2Q06481 763 aa7.97□□□□□ -1.13
RNU6-228P-201ENST00000362700 AKT1S1Q96B36 256 aa7.87□□□□□ -1.15
RNU6-228P-201ENST00000362700 POTEMA6NI47 508 aa7.83□□□□□ -1.16
RNU6-228P-201ENST00000362700 FXR2P51116 673 aaKnown RBP eCLIP7.83□□□□□ -1.16
RNU6-228P-201ENST00000362700 GABBR2O75899 941 aa7.79□□□□□ -1.16
RNU6-228P-201ENST00000362700 REM2Q8IYK8 340 aaPredicted RBP7.78□□□□□ -1.16
RNU6-228P-201ENST00000362700 PCDH10Q9P2E7 1040 aa7.78□□□□□ -1.16
RNU6-228P-201ENST00000362700 POTEGQ6S5H5 508 aa7.76□□□□□ -1.17
RNU6-228P-201ENST00000362700 PITPNM1O00562 1244 aa7.71□□□□□ -1.18
RNU6-228P-201ENST00000362700 NCBP3Q53F19 620 aaKnown RBP7.69□□□□□ -1.18
RNU6-228P-201ENST00000362700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.67□□□□□ -1.18
RNU6-228P-201ENST00000362700 HNRNPUL2Q1KMD3 747 aaKnown RBP7.67□□□□□ -1.18
RNU6-228P-201ENST00000362700 C19orf67A6NJJ6 358 aa7.63□□□□□ -1.19
RNU6-228P-201ENST00000362700 POLA2Q14181 598 aa7.59□□□□□ -1.19
RNU6-228P-201ENST00000362700 POTEIP0CG38 1075 aa7.57□□□□□ -1.2
RNU6-228P-201ENST00000362700 SAMD1Q6SPF0 538 aaPredicted RBP7.55□□□□□ -1.2
RNU6-228P-201ENST00000362700 PRKAR2AP13861 404 aaKnown RBP7.52□□□□□ -1.21
RNU6-228P-201ENST00000362700 OTUD5Q96G74 571 aa7.51□□□□□ -1.21
RNU6-228P-201ENST00000362700 NPM3O75607 178 aaKnown RBP7.49□□□□□ -1.21
RNU6-228P-201ENST00000362700 DCBLD2Q96PD2 775 aa7.43□□□□□ -1.22
RNU6-228P-201ENST00000362700 ZBTB12Q9Y330 459 aaPredicted RBP7.42□□□□□ -1.22
RNU6-228P-201ENST00000362700 SLC4A2P04920 1241 aa7.4□□□□□ -1.22
RNU6-228P-201ENST00000362700 OSCARQ8IYS5 282 aa7.39□□□□□ -1.23
RNU6-228P-201ENST00000362700 CLCN6P51797 869 aa7.37□□□□□ -1.23
RNU6-228P-201ENST00000362700 POTEB2H3BUK9 544 aa7.28□□□□□ -1.24
RNU6-228P-201ENST00000362700 FAM163AQ96GL9 167 aaPredicted RBP7.27□□□□□ -1.25
RNU6-228P-201ENST00000362700 CLEC11AQ9Y240 323 aa7.27□□□□□ -1.25
RNU6-228P-201ENST00000362700 LCE2DQ5TA82 110 aaPredicted RBP7.24□□□□□ -1.25
RNU6-228P-201ENST00000362700 CD44P16070 742 aaKnown RBP7.23□□□□□ -1.25
RNU6-228P-201ENST00000362700 CDAN1Q8IWY9 1227 aa7.23□□□□□ -1.25
RNU6-228P-201ENST00000362700 SPDYE1Q8NFV5 336 aaPredicted RBP7.21□□□□□ -1.26
RNU6-228P-201ENST00000362700 CHADLQ6NUI6 762 aa7.19□□□□□ -1.26
RNU6-228P-201ENST00000362700 MMRN1Q13201 1228 aa7.17□□□□□ -1.26
RNU6-228P-201ENST00000362700 MAMSTRQ6ZN01 415 aa7.15□□□□□ -1.26
RNU6-228P-201ENST00000362700 SPDYE2BA6NHP3 402 aa7.06□□□□□ -1.28
RNU6-228P-201ENST00000362700 SPDYE6P0CI01 402 aa7.06□□□□□ -1.28
RNU6-228P-201ENST00000362700 SPDYE2Q495Y8 402 aa7.06□□□□□ -1.28
RNU6-228P-201ENST00000362700 SPNS2Q8IVW8 549 aa7.06□□□□□ -1.28
RNU6-228P-201ENST00000362700 ZNF579Q8NAF0 562 aaKnown RBP7.04□□□□□ -1.28
RNU6-228P-201ENST00000362700 SCUBE2Q9NQ36 999 aa7.04□□□□□ -1.28
RNU6-228P-201ENST00000362700 GALR2O43603 387 aaPredicted RBP7.01□□□□□ -1.29
RNU6-228P-201ENST00000362700 MYCNP04198 464 aaPredicted RBP7.01□□□□□ -1.29
RNU6-228P-201ENST00000362700 PRR29P0C7W0 189 aa6.99□□□□□ -1.29
RNU6-228P-201ENST00000362700 POTEJP0CG39 1038 aa6.99□□□□□ -1.29
RNU6-228P-201ENST00000362700 METRNQ9UJH8 293 aa6.98□□□□□ -1.29
RNU6-228P-201ENST00000362700 FARP1Q9Y4F1 1045 aaPredicted RBP6.98□□□□□ -1.29
RNU6-228P-201ENST00000362700 ZRANB1Q9UGI0 708 aa6.96□□□□□ -1.3
RNU6-228P-201ENST00000362700 PELP1Q8IZL8 1130 aaKnown RBP6.94□□□□□ -1.3
RNU6-228P-201ENST00000362700 C7P10643 843 aa6.92□□□□□ -1.3
RNU6-228P-201ENST00000362700 SLC39A7Q92504 469 aa6.92□□□□□ -1.3
RNU6-228P-201ENST00000362700 ATF5Q9Y2D1 282 aaPredicted RBP6.84□□□□□ -1.31
RNU6-228P-201ENST00000362700 ST18O60284 1047 aa6.81□□□□□ -1.32
RNU6-228P-201ENST00000362700 ZNF692Q9BU19 519 aaPredicted RBP6.81□□□□□ -1.32
RNU6-228P-201ENST00000362700 ASTLQ6HA08 431 aaPredicted RBP6.8□□□□□ -1.32
RNU6-228P-201ENST00000362700 SSUH2Q9Y2M2 353 aa6.8□□□□□ -1.32
RNU6-228P-201ENST00000362700 FBLN2P98095 1184 aa6.78□□□□□ -1.32
RNU6-228P-201ENST00000362700 ATMINO43313 823 aaPredicted RBP6.76□□□□□ -1.33
RNU6-228P-201ENST00000362700 PAK3O75914 559 aaPredicted RBP6.75□□□□□ -1.33
RNU6-228P-201ENST00000362700 PHF12Q96QT6 1004 aa6.75□□□□□ -1.33
RNU6-228P-201ENST00000362700 TMEM121BQ9BXQ6 578 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms