Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU6-460P-201ENST00000391158 108 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 SNORA48.8-201ENST00000391324 134 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 MIR1289-1-201ENST00000408836 144 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 RNU6-588P-201ENST00000410281 105 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 MICF-203ENST00000432679 129 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 AC006539.3-201ENST00000454258 129 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 AC010531.2-201ENST00000465012 153 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.57□□□□□ -1.84
CNTN3Q9P232 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
CNTN3Q9P232 ATP5EP1-201ENST00000510257 156 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 PHBP14-201ENST00000512887 367 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 RN7SKP179-201ENST00000516126 217 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 MIR2276-201ENST00000516886 89 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 AC025647.1-201ENST00000517879 253 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 AL160236.1-201ENST00000556317 195 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CNTN3Q9P232 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CNTN3Q9P232 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CNTN3Q9P232 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.57□□□□□ -1.84
CNTN3Q9P232 MIR7157-201ENST00000635801 60 ntBASIC3.57□□□□□ -1.84
CNTN3Q9P232 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CNTN3Q9P232 RNU4-13P-201ENST00000364019 141 ntBASIC3.56□□□□□ -1.84
CNTN3Q9P232 RNU4-41P-201ENST00000364426 143 ntBASIC3.56□□□□□ -1.84
CNTN3Q9P232 Y_RNA.251-201ENST00000364551 99 ntBASIC3.56□□□□□ -1.84
CNTN3Q9P232 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.56□□□□□ -1.84
CNTN3Q9P232 Y_RNA.622-201ENST00000411091 108 ntBASIC3.56□□□□□ -1.84
CNTN3Q9P232 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.56□□□□□ -1.84
CNTN3Q9P232 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.56□□□□□ -1.84
CNTN3Q9P232 AL035461.1-201ENST00000421490 332 ntBASIC3.56□□□□□ -1.84
CNTN3Q9P232 AC245047.4-201ENST00000433189 144 ntBASIC3.56□□□□□ -1.84
CNTN3Q9P232 SCARNA17.1-201ENST00000516211 143 ntBASIC3.56□□□□□ -1.84
CNTN3Q9P232 SCARNA17.2-201ENST00000516334 143 ntBASIC3.56□□□□□ -1.84
CNTN3Q9P232 RNU2-56P-201ENST00000516826 190 ntBASIC3.56□□□□□ -1.84
CNTN3Q9P232 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.56□□□□□ -1.84
CNTN3Q9P232 MIR3200-201ENST00000580767 85 ntBASIC3.56□□□□□ -1.84
CNTN3Q9P232 SCARNA17.4-201ENST00000614296 143 ntBASIC3.56□□□□□ -1.84
CNTN3Q9P232 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CNTN3Q9P232 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CNTN3Q9P232 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.55□□□□□ -1.84
CNTN3Q9P232 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.55□□□□□ -1.84
CNTN3Q9P232 SNORA38.1-201ENST00000364172 131 ntBASIC3.55□□□□□ -1.84
CNTN3Q9P232 RNU6-1240P-201ENST00000365155 104 ntBASIC3.55□□□□□ -1.84
CNTN3Q9P232 RNU6-438P-201ENST00000365561 103 ntBASIC3.55□□□□□ -1.84
CNTN3Q9P232 Y_RNA.563-201ENST00000384707 108 ntBASIC3.55□□□□□ -1.84
CNTN3Q9P232 Y_RNA.587-201ENST00000391210 103 ntBASIC3.55□□□□□ -1.84
CNTN3Q9P232 RNA5SP229-201ENST00000410809 99 ntBASIC3.55□□□□□ -1.84
CNTN3Q9P232 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.55□□□□□ -1.84
CNTN3Q9P232 AL353705.1-201ENST00000433468 480 ntBASIC3.55□□□□□ -1.84
CNTN3Q9P232 AC016717.1-201ENST00000448918 286 ntBASIC3.55□□□□□ -1.84
CNTN3Q9P232 RNU6-659P-201ENST00000516454 104 ntBASIC3.55□□□□□ -1.84
CNTN3Q9P232 RN7SKP57-201ENST00000517248 293 ntBASIC3.55□□□□□ -1.84
CNTN3Q9P232 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.55□□□□□ -1.84
CNTN3Q9P232 AC093331.1-201ENST00000521474 169 ntBASIC3.55□□□□□ -1.84
CNTN3Q9P232 MIR5004-201ENST00000579078 107 ntBASIC3.55□□□□□ -1.84
CNTN3Q9P232 MIR7515-201ENST00000637837 67 ntBASIC3.55□□□□□ -1.84
CNTN3Q9P232 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CNTN3Q9P232 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.55□□□□□ -1.84
CNTN3Q9P232 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CNTN3Q9P232 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNTN3Q9P232 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CNTN3Q9P232 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNTN3Q9P232 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNTN3Q9P232 SNORA68.1-201ENST00000364537 132 ntBASIC3.54□□□□□ -1.84
CNTN3Q9P232 SNORA72-201ENST00000384339 132 ntBASIC3.54□□□□□ -1.84
CNTN3Q9P232 MIR181A2-201ENST00000384863 110 ntBASIC3.54□□□□□ -1.84
CNTN3Q9P232 RNU4-47P-201ENST00000410876 114 ntBASIC3.54□□□□□ -1.84
CNTN3Q9P232 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.54□□□□□ -1.84
CNTN3Q9P232 SNORA74D-201ENST00000516404 141 ntBASIC3.54□□□□□ -1.84
CNTN3Q9P232 RNU6-197P-201ENST00000516680 100 ntBASIC3.54□□□□□ -1.84
CNTN3Q9P232 AC090142.3-201ENST00000519012 385 ntBASIC3.54□□□□□ -1.84
CNTN3Q9P232 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.54□□□□□ -1.84
CNTN3Q9P232 MIR2681-201ENST00000581814 105 ntBASIC3.54□□□□□ -1.84
CNTN3Q9P232 AL021707.8-201ENST00000609428 183 ntBASIC3.54□□□□□ -1.84
CNTN3Q9P232 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.54□□□□□ -1.84
CNTN3Q9P232 MIR8057-201ENST00000620957 69 ntBASIC3.54□□□□□ -1.84
CNTN3Q9P232 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNTN3Q9P232 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.53□□□□□ -1.84
CNTN3Q9P232 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.53□□□□□ -1.84
CNTN3Q9P232 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNTN3Q9P232 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNTN3Q9P232 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNTN3Q9P232 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTN3Q9P232 RNU6-1325P-201ENST00000364905 105 ntBASIC3.53□□□□□ -1.84
CNTN3Q9P232 RNU6-1080P-201ENST00000383982 107 ntBASIC3.53□□□□□ -1.84
CNTN3Q9P232 U6atac.2-201ENST00000408644 118 ntBASIC3.53□□□□□ -1.84
CNTN3Q9P232 TRIAP1P1-201ENST00000427062 225 ntBASIC3.53□□□□□ -1.84
CNTN3Q9P232 AC006028.1-201ENST00000438379 402 ntBASIC3.53□□□□□ -1.84
CNTN3Q9P232 AC115115.1-201ENST00000449927 248 ntBASIC3.53□□□□□ -1.84
CNTN3Q9P232 RN7SL504P-201ENST00000494496 287 ntBASIC3.53□□□□□ -1.84
CNTN3Q9P232 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTN3Q9P232 AC027419.1-201ENST00000522976 328 ntBASIC3.53□□□□□ -1.84
CNTN3Q9P232 uc_338.1-201ENST00000612113 180 ntBASIC3.53□□□□□ -1.84
CNTN3Q9P232 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CNTN3Q9P232 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CNTN3Q9P232 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CNTN3Q9P232 RNU1-72P-201ENST00000362976 153 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 SNORA25.7-201ENST00000364375 127 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 RNU6-117P-201ENST00000365415 107 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNTN3Q9P232 RNU6-1056P-201ENST00000383996 107 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 295.6 ms