RNA–Protein interactions for RNA: ENST00000365561.1

RNU6-438P-201, Transcript of RNA, U6 small nuclear 438, pseudogene, humanhuman

BASIC

Gene RNU6-438P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-438P-201ENST00000365561 AEBP2Q6ZN18 517 aaPredicted RBP11.79□□□□□ -0.52
RNU6-438P-201ENST00000365561 CHIC1Q5VXU3 224 aa10.82□□□□□ -0.68
RNU6-438P-201ENST00000365561 POTEDQ86YR6 584 aa10.67□□□□□ -0.7
RNU6-438P-201ENST00000365561 SENP3Q9H4L4 574 aaPredicted RBP10.05□□□□□ -0.8
RNU6-438P-201ENST00000365561 PHF23Q9BUL5 403 aaPredicted RBP9.85□□□□□ -0.83
RNU6-438P-201ENST00000365561 FOXD1Q16676 465 aa9.58□□□□□ -0.88
RNU6-438P-201ENST00000365561 MSH5O43196 834 aa9.2□□□□□ -0.94
RNU6-438P-201ENST00000365561 PIAS4Q8N2W9 510 aaPredicted RBP8.64□□□□□ -1.03
RNU6-438P-201ENST00000365561 CACNB1Q02641 598 aaPredicted RBP8.47□□□□□ -1.05
RNU6-438P-201ENST00000365561 PPP6R1Q9UPN7 881 aa8.3□□□□□ -1.08
RNU6-438P-201ENST00000365561 ADRA2BP18089 450 aa8.16□□□□□ -1.1
RNU6-438P-201ENST00000365561 POTEHQ6S545 545 aa8.15□□□□□ -1.1
RNU6-438P-201ENST00000365561 PLPPR3Q6T4P5 718 aa7.93□□□□□ -1.14
RNU6-438P-201ENST00000365561 DMRT2Q9Y5R5 561 aa7.87□□□□□ -1.15
RNU6-438P-201ENST00000365561 RNF39Q9H2S5 420 aa7.84□□□□□ -1.15
RNU6-438P-201ENST00000365561 MAPK8IP2Q13387 824 aaPredicted RBP7.81□□□□□ -1.16
RNU6-438P-201ENST00000365561 C1QBPQ07021 282 aaKnown RBP7.62□□□□□ -1.19
RNU6-438P-201ENST00000365561 DCAF8L1A6NGE4 600 aa7.5□□□□□ -1.21
RNU6-438P-201ENST00000365561 SCAF1Q9H7N4 1312 aaKnown RBP7.3□□□□□ -1.24
RNU6-438P-201ENST00000365561 HOXD11P31277 338 aaPredicted RBP7.23□□□□□ -1.25
RNU6-438P-201ENST00000365561 SP7Q8TDD2 431 aaPredicted RBP7.19□□□□□ -1.26
RNU6-438P-201ENST00000365561 DNAJC5BQ9UF47 199 aa7.13□□□□□ -1.27
RNU6-438P-201ENST00000365561 DSG3P32926 999 aa7.05□□□□□ -1.28
RNU6-438P-201ENST00000365561 PLSCR2Q9NRY7 297 aa7.05□□□□□ -1.28
RNU6-438P-201ENST00000365561 KCNA4P22459 653 aa7.04□□□□□ -1.28
RNU6-438P-201ENST00000365561 PPP4R3CPQ6ZMV5 832 aa7□□□□□ -1.29
RNU6-438P-201ENST00000365561 CHRDL2Q6WN34 429 aa6.92□□□□□ -1.3
RNU6-438P-201ENST00000365561 RNF216Q9NWF9 866 aaPredicted RBP6.88□□□□□ -1.31
RNU6-438P-201ENST00000365561 NCBP3Q53F19 620 aaKnown RBP6.87□□□□□ -1.31
RNU6-438P-201ENST00000365561 SPINK5Q9NQ38 1064 aaPredicted RBP6.84□□□□□ -1.31
RNU6-438P-201ENST00000365561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.8□□□□□ -1.32
RNU6-438P-201ENST00000365561 CAPN15O75808 1086 aa6.78□□□□□ -1.32
RNU6-438P-201ENST00000365561 CNKSR2Q8WXI2 1034 aa6.78□□□□□ -1.32
RNU6-438P-201ENST00000365561 NPM3O75607 178 aaKnown RBP6.77□□□□□ -1.33
RNU6-438P-201ENST00000365561 SLC4A1APQ9BWU0 796 aaKnown RBP6.73□□□□□ -1.33
RNU6-438P-201ENST00000365561 LHX8Q68G74 356 aa6.72□□□□□ -1.33
RNU6-438P-201ENST00000365561 EHMT2Q96KQ7 1210 aa6.68□□□□□ -1.34
RNU6-438P-201ENST00000365561 HAX1O00165 279 aa6.66□□□□□ -1.34
RNU6-438P-201ENST00000365561 EVX2Q03828 476 aa6.66□□□□□ -1.34
RNU6-438P-201ENST00000365561 CSRNP3Q8WYN3 585 aa6.65□□□□□ -1.34
RNU6-438P-201ENST00000365561 U3KPZ7 1027 aaPredicted RBP6.65□□□□□ -1.34
RNU6-438P-201ENST00000365561 RBM42Q9BTD8 480 aaKnown RBP6.61□□□□□ -1.35
RNU6-438P-201ENST00000365561 ABCB7O75027 752 aa6.59□□□□□ -1.35
RNU6-438P-201ENST00000365561 PIP4P2Q8N4L2 257 aa6.59□□□□□ -1.35
RNU6-438P-201ENST00000365561 ZBTB22O15209 634 aa6.51□□□□□ -1.37
RNU6-438P-201ENST00000365561 TRHP20396 242 aaPredicted RBP6.46□□□□□ -1.38
RNU6-438P-201ENST00000365561 FOXD4L1Q9NU39 408 aa6.45□□□□□ -1.38
RNU6-438P-201ENST00000365561 FXR2P51116 673 aaKnown RBP eCLIP6.41□□□□□ -1.38
RNU6-438P-201ENST00000365561 POTEMA6NI47 508 aa6.38□□□□□ -1.39
RNU6-438P-201ENST00000365561 SLC4A2P04920 1241 aa6.38□□□□□ -1.39
RNU6-438P-201ENST00000365561 GABBR2O75899 941 aa6.37□□□□□ -1.39
RNU6-438P-201ENST00000365561 ZNF219Q9P2Y4 722 aaPredicted RBP6.37□□□□□ -1.39
RNU6-438P-201ENST00000365561 POTEGQ6S5H5 508 aa6.33□□□□□ -1.4
RNU6-438P-201ENST00000365561 AKT1S1Q96B36 256 aa6.32□□□□□ -1.4
RNU6-438P-201ENST00000365561 POTEIP0CG38 1075 aa6.3□□□□□ -1.4
RNU6-438P-201ENST00000365561 REM2Q8IYK8 340 aaPredicted RBP6.3□□□□□ -1.4
RNU6-438P-201ENST00000365561 ATXN8OSP0DMR3 200 aa6.27□□□□□ -1.41
RNU6-438P-201ENST00000365561 PCDH10Q9P2E7 1040 aa6.27□□□□□ -1.41
RNU6-438P-201ENST00000365561 PITPNM1O00562 1244 aa6.26□□□□□ -1.41
RNU6-438P-201ENST00000365561 MYCNP04198 464 aaPredicted RBP6.26□□□□□ -1.41
RNU6-438P-201ENST00000365561 C19orf67A6NJJ6 358 aa6.23□□□□□ -1.41
RNU6-438P-201ENST00000365561 OTUD5Q96G74 571 aa6.21□□□□□ -1.42
RNU6-438P-201ENST00000365561 APLP2Q06481 763 aa6.17□□□□□ -1.42
RNU6-438P-201ENST00000365561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.11□□□□□ -1.43
RNU6-438P-201ENST00000365561 POLA2Q14181 598 aa6.11□□□□□ -1.43
RNU6-438P-201ENST00000365561 HNRNPUL2Q1KMD3 747 aaKnown RBP6.11□□□□□ -1.43
RNU6-438P-201ENST00000365561 SAMD1Q6SPF0 538 aaPredicted RBP6.1□□□□□ -1.43
RNU6-438P-201ENST00000365561 POTEB2H3BUK9 544 aa6.09□□□□□ -1.43
RNU6-438P-201ENST00000365561 LCE2DQ5TA82 110 aaPredicted RBP6.08□□□□□ -1.44
RNU6-438P-201ENST00000365561 ATF5Q9Y2D1 282 aaPredicted RBP6.06□□□□□ -1.44
RNU6-438P-201ENST00000365561 PRKAR2AP13861 404 aaKnown RBP6.05□□□□□ -1.44
RNU6-438P-201ENST00000365561 OSCARQ8IYS5 282 aa5.95□□□□□ -1.46
RNU6-438P-201ENST00000365561 FKBP8Q14318 412 aa5.92□□□□□ -1.46
RNU6-438P-201ENST00000365561 DCBLD2Q96PD2 775 aa5.91□□□□□ -1.46
RNU6-438P-201ENST00000365561 CDAN1Q8IWY9 1227 aa5.88□□□□□ -1.47
RNU6-438P-201ENST00000365561 FAM163AQ96GL9 167 aaPredicted RBP5.87□□□□□ -1.47
RNU6-438P-201ENST00000365561 MMRN1Q13201 1228 aa5.86□□□□□ -1.47
RNU6-438P-201ENST00000365561 POTEJP0CG39 1038 aa5.85□□□□□ -1.47
RNU6-438P-201ENST00000365561 MKRN4PQ13434 485 aaPredicted RBP5.83□□□□□ -1.48
RNU6-438P-201ENST00000365561 CHADLQ6NUI6 762 aa5.83□□□□□ -1.48
RNU6-438P-201ENST00000365561 CLCN6P51797 869 aa5.82□□□□□ -1.48
RNU6-438P-201ENST00000365561 PROM2Q8N271 834 aa5.81□□□□□ -1.48
RNU6-438P-201ENST00000365561 AMER1Q5JTC6 1135 aaPredicted RBP5.8□□□□□ -1.48
RNU6-438P-201ENST00000365561 CD44P16070 742 aaKnown RBP5.79□□□□□ -1.48
RNU6-438P-201ENST00000365561 ZBTB12Q9Y330 459 aaPredicted RBP5.79□□□□□ -1.48
RNU6-438P-201ENST00000365561 SPNS2Q8IVW8 549 aa5.78□□□□□ -1.48
RNU6-438P-201ENST00000365561 CLEC11AQ9Y240 323 aa5.77□□□□□ -1.49
RNU6-438P-201ENST00000365561 FBLN2P98095 1184 aa5.76□□□□□ -1.49
RNU6-438P-201ENST00000365561 SPDYE4A6NLX3 237 aa5.75□□□□□ -1.49
RNU6-438P-201ENST00000365561 RTN4Q9NQC3 1192 aaKnown RBP5.75□□□□□ -1.49
RNU6-438P-201ENST00000365561 PELP1Q8IZL8 1130 aaKnown RBP5.74□□□□□ -1.49
RNU6-438P-201ENST00000365561 GALR2O43603 387 aaPredicted RBP5.72□□□□□ -1.49
RNU6-438P-201ENST00000365561 SPDYE1Q8NFV5 336 aaPredicted RBP5.71□□□□□ -1.5
RNU6-438P-201ENST00000365561 FBXO3Q9UK99 471 aa5.7□□□□□ -1.5
RNU6-438P-201ENST00000365561 ZNF579Q8NAF0 562 aaKnown RBP5.68□□□□□ -1.5
RNU6-438P-201ENST00000365561 MAMSTRQ6ZN01 415 aa5.64□□□□□ -1.51
RNU6-438P-201ENST00000365561 SPDYE2BA6NHP3 402 aa5.63□□□□□ -1.51
RNU6-438P-201ENST00000365561 SPDYE6P0CI01 402 aa5.63□□□□□ -1.51
RNU6-438P-201ENST00000365561 SPDYE2Q495Y8 402 aa5.63□□□□□ -1.51
RNU6-438P-201ENST00000365561 SSUH2Q9Y2M2 353 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms