RNA–Protein interactions for RNA: ENST00000391158.1

RNU6-460P-201, Transcript of RNA, U6 small nuclear 460, pseudogene, humanhuman

BASIC

Gene RNU6-460P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-460P-201ENST00000391158 AEBP2Q6ZN18 517 aaPredicted RBP14.86□□□□□ -0.03
RNU6-460P-201ENST00000391158 CHIC1Q5VXU3 224 aa14.04□□□□□ -0.16
RNU6-460P-201ENST00000391158 SENP3Q9H4L4 574 aaPredicted RBP12.87□□□□□ -0.35
RNU6-460P-201ENST00000391158 PHF23Q9BUL5 403 aaPredicted RBP12.59□□□□□ -0.39
RNU6-460P-201ENST00000391158 FOXD1Q16676 465 aa11.94□□□□□ -0.5
RNU6-460P-201ENST00000391158 POTEDQ86YR6 584 aa11.61□□□□□ -0.55
RNU6-460P-201ENST00000391158 MSH5O43196 834 aa11.42□□□□□ -0.58
RNU6-460P-201ENST00000391158 PIAS4Q8N2W9 510 aaPredicted RBP11.13□□□□□ -0.63
RNU6-460P-201ENST00000391158 PLPPR3Q6T4P5 718 aa10.99□□□□□ -0.65
RNU6-460P-201ENST00000391158 PPP6R1Q9UPN7 881 aa10.85□□□□□ -0.67
RNU6-460P-201ENST00000391158 ADRA2BP18089 450 aa10.83□□□□□ -0.68
RNU6-460P-201ENST00000391158 DMRT2Q9Y5R5 561 aa10.12□□□□□ -0.79
RNU6-460P-201ENST00000391158 SCAF1Q9H7N4 1312 aaKnown RBP10.07□□□□□ -0.8
RNU6-460P-201ENST00000391158 MAPK8IP2Q13387 824 aaPredicted RBP10.02□□□□□ -0.81
RNU6-460P-201ENST00000391158 CACNB1Q02641 598 aaPredicted RBP9.97□□□□□ -0.81
RNU6-460P-201ENST00000391158 DCAF8L1A6NGE4 600 aa9.73□□□□□ -0.85
RNU6-460P-201ENST00000391158 RNF39Q9H2S5 420 aa9.65□□□□□ -0.86
RNU6-460P-201ENST00000391158 HOXD11P31277 338 aaPredicted RBP9.61□□□□□ -0.87
RNU6-460P-201ENST00000391158 C1QBPQ07021 282 aaKnown RBP9.55□□□□□ -0.88
RNU6-460P-201ENST00000391158 PPP4R3CPQ6ZMV5 832 aa9.54□□□□□ -0.88
RNU6-460P-201ENST00000391158 RNF216Q9NWF9 866 aaPredicted RBP9.48□□□□□ -0.89
RNU6-460P-201ENST00000391158 CNKSR2Q8WXI2 1034 aa9.47□□□□□ -0.89
RNU6-460P-201ENST00000391158 DNAJC5BQ9UF47 199 aa9.42□□□□□ -0.9
RNU6-460P-201ENST00000391158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.19□□□□□ -0.94
RNU6-460P-201ENST00000391158 NCBP3Q53F19 620 aaKnown RBP9.17□□□□□ -0.94
RNU6-460P-201ENST00000391158 POTEHQ6S545 545 aa9.06□□□□□ -0.96
RNU6-460P-201ENST00000391158 NPM3O75607 178 aaKnown RBP8.92□□□□□ -0.98
RNU6-460P-201ENST00000391158 CAPN15O75808 1086 aa8.92□□□□□ -0.98
RNU6-460P-201ENST00000391158 DSG3P32926 999 aa8.9□□□□□ -0.98
RNU6-460P-201ENST00000391158 U3KPZ7 1027 aaPredicted RBP8.9□□□□□ -0.98
RNU6-460P-201ENST00000391158 SPINK5Q9NQ38 1064 aaPredicted RBP8.84□□□□□ -0.99
RNU6-460P-201ENST00000391158 APLP2Q06481 763 aa8.79□□□□□ -1
RNU6-460P-201ENST00000391158 ZNF219Q9P2Y4 722 aaPredicted RBP8.72□□□□□ -1.01
RNU6-460P-201ENST00000391158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.67□□□□□ -1.02
RNU6-460P-201ENST00000391158 TRHP20396 242 aaPredicted RBP8.67□□□□□ -1.02
RNU6-460P-201ENST00000391158 HNRNPUL2Q1KMD3 747 aaKnown RBP8.67□□□□□ -1.02
RNU6-460P-201ENST00000391158 ABCB7O75027 752 aa8.63□□□□□ -1.03
RNU6-460P-201ENST00000391158 RBM42Q9BTD8 480 aaKnown RBP8.62□□□□□ -1.03
RNU6-460P-201ENST00000391158 SLC4A2P04920 1241 aa8.58□□□□□ -1.04
RNU6-460P-201ENST00000391158 SAMD1Q6SPF0 538 aaPredicted RBP8.57□□□□□ -1.04
RNU6-460P-201ENST00000391158 CHRDL2Q6WN34 429 aa8.49□□□□□ -1.05
RNU6-460P-201ENST00000391158 KCNA4P22459 653 aa8.43□□□□□ -1.06
RNU6-460P-201ENST00000391158 POLA2Q14181 598 aa8.36□□□□□ -1.07
RNU6-460P-201ENST00000391158 SP7Q8TDD2 431 aaPredicted RBP8.35□□□□□ -1.07
RNU6-460P-201ENST00000391158 MYCNP04198 464 aaPredicted RBP8.33□□□□□ -1.08
RNU6-460P-201ENST00000391158 AKT1S1Q96B36 256 aa8.31□□□□□ -1.08
RNU6-460P-201ENST00000391158 ZBTB12Q9Y330 459 aaPredicted RBP8.29□□□□□ -1.08
RNU6-460P-201ENST00000391158 REM2Q8IYK8 340 aaPredicted RBP8.18□□□□□ -1.1
RNU6-460P-201ENST00000391158 PIP4P2Q8N4L2 257 aa8.18□□□□□ -1.1
RNU6-460P-201ENST00000391158 HAX1O00165 279 aa8.17□□□□□ -1.1
RNU6-460P-201ENST00000391158 PITPNM1O00562 1244 aa8.09□□□□□ -1.11
RNU6-460P-201ENST00000391158 FXR2P51116 673 aaKnown RBP eCLIP8.09□□□□□ -1.11
RNU6-460P-201ENST00000391158 OSCARQ8IYS5 282 aa8.09□□□□□ -1.11
RNU6-460P-201ENST00000391158 FOXD4L1Q9NU39 408 aa8.04□□□□□ -1.12
RNU6-460P-201ENST00000391158 ATF5Q9Y2D1 282 aaPredicted RBP8.03□□□□□ -1.12
RNU6-460P-201ENST00000391158 SPDYE2BA6NHP3 402 aa7.95□□□□□ -1.14
RNU6-460P-201ENST00000391158 SPDYE6P0CI01 402 aa7.95□□□□□ -1.14
RNU6-460P-201ENST00000391158 SPDYE2Q495Y8 402 aa7.95□□□□□ -1.14
RNU6-460P-201ENST00000391158 SLC4A1APQ9BWU0 796 aaKnown RBP7.95□□□□□ -1.14
RNU6-460P-201ENST00000391158 EVX2Q03828 476 aa7.92□□□□□ -1.14
RNU6-460P-201ENST00000391158 FBLN2P98095 1184 aa7.91□□□□□ -1.14
RNU6-460P-201ENST00000391158 SPDYE1Q8NFV5 336 aaPredicted RBP7.9□□□□□ -1.14
RNU6-460P-201ENST00000391158 PRKAR2AP13861 404 aaKnown RBP7.89□□□□□ -1.15
RNU6-460P-201ENST00000391158 ATXN8OSP0DMR3 200 aa7.87□□□□□ -1.15
RNU6-460P-201ENST00000391158 C19orf67A6NJJ6 358 aa7.85□□□□□ -1.15
RNU6-460P-201ENST00000391158 CLEC11AQ9Y240 323 aa7.85□□□□□ -1.15
RNU6-460P-201ENST00000391158 LHX8Q68G74 356 aa7.82□□□□□ -1.16
RNU6-460P-201ENST00000391158 GABBR2O75899 941 aa7.8□□□□□ -1.16
RNU6-460P-201ENST00000391158 ZNF692Q9BU19 519 aaPredicted RBP7.77□□□□□ -1.17
RNU6-460P-201ENST00000391158 SSUH2Q9Y2M2 353 aa7.76□□□□□ -1.17
RNU6-460P-201ENST00000391158 CLCN6P51797 869 aa7.71□□□□□ -1.18
RNU6-460P-201ENST00000391158 ZBTB22O15209 634 aa7.7□□□□□ -1.18
RNU6-460P-201ENST00000391158 PRR29P0C7W0 189 aa7.7□□□□□ -1.18
RNU6-460P-201ENST00000391158 CHADLQ6NUI6 762 aa7.68□□□□□ -1.18
RNU6-460P-201ENST00000391158 MKRN4PQ13434 485 aaPredicted RBP7.67□□□□□ -1.18
RNU6-460P-201ENST00000391158 CD44P16070 742 aaKnown RBP7.64□□□□□ -1.19
RNU6-460P-201ENST00000391158 PABPN1Q86U42 306 aaKnown RBP eCLIP7.62□□□□□ -1.19
RNU6-460P-201ENST00000391158 PLSCR2Q9NRY7 297 aa7.6□□□□□ -1.19
RNU6-460P-201ENST00000391158 DCBLD2Q96PD2 775 aa7.59□□□□□ -1.19
RNU6-460P-201ENST00000391158 FARP1Q9Y4F1 1045 aaPredicted RBP7.59□□□□□ -1.19
RNU6-460P-201ENST00000391158 POTEIP0CG38 1075 aa7.58□□□□□ -1.2
RNU6-460P-201ENST00000391158 ZNF579Q8NAF0 562 aaKnown RBP7.51□□□□□ -1.21
RNU6-460P-201ENST00000391158 ZRANB1Q9UGI0 708 aa7.47□□□□□ -1.21
RNU6-460P-201ENST00000391158 STAG3Q9UJ98 1225 aa7.44□□□□□ -1.22
RNU6-460P-201ENST00000391158 PAK3O75914 559 aaPredicted RBP7.43□□□□□ -1.22
RNU6-460P-201ENST00000391158 OTUD5Q96G74 571 aa7.39□□□□□ -1.23
RNU6-460P-201ENST00000391158 GALR2O43603 387 aaPredicted RBP7.38□□□□□ -1.23
RNU6-460P-201ENST00000391158 POTEMA6NI47 508 aa7.37□□□□□ -1.23
RNU6-460P-201ENST00000391158 CREBZFQ9NS37 354 aa7.37□□□□□ -1.23
RNU6-460P-201ENST00000391158 PCDH10Q9P2E7 1040 aa7.37□□□□□ -1.23
RNU6-460P-201ENST00000391158 POTEGQ6S5H5 508 aa7.34□□□□□ -1.23
RNU6-460P-201ENST00000391158 NPM1P06748 294 aaKnown RBP eCLIP7.33□□□□□ -1.24
RNU6-460P-201ENST00000391158 POTEB2H3BUK9 544 aa7.31□□□□□ -1.24
RNU6-460P-201ENST00000391158 MAMSTRQ6ZN01 415 aa7.31□□□□□ -1.24
RNU6-460P-201ENST00000391158 PHF12Q96QT6 1004 aa7.3□□□□□ -1.24
RNU6-460P-201ENST00000391158 C7P10643 843 aa7.28□□□□□ -1.24
RNU6-460P-201ENST00000391158 SLC39A7Q92504 469 aa7.28□□□□□ -1.24
RNU6-460P-201ENST00000391158 METRNQ9UJH8 293 aa7.27□□□□□ -1.25
RNU6-460P-201ENST00000391158 ASTLQ6HA08 431 aaPredicted RBP7.25□□□□□ -1.25
RNU6-460P-201ENST00000391158 PELP1Q8IZL8 1130 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms