Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC073325.2-201ENST00000339545 159 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNU4-35P-201ENST00000362588 141 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNA5SP403-201ENST00000363598 108 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNU1-65P-201ENST00000363919 148 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 Y_RNA.407-201ENST00000383986 113 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 MIR1275-201ENST00000408770 80 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC108479.1-201ENST00000431142 427 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 SNORA71B-202ENST00000439232 272 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNA5SP43-201ENST00000516559 110 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 MIR3154-201ENST00000577829 84 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 RN7SL290P-201ENST00000578661 300 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 AP000942.3-201ENST00000603702 160 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 SNRPGP19-201ENST00000603826 189 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC110741.2-201ENST00000605278 268 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 DOCK11P1-201ENST00000553480 5932 ntBASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP9-4Q9BYQ2 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNA5SP232-201ENST00000364144 119 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNA5SP478-201ENST00000364657 115 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNU6-171P-201ENST00000384354 107 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNA5SP122-201ENST00000384457 108 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNU6-535P-201ENST00000384722 107 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 MIR188-201ENST00000385034 86 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 RPS16P5-201ENST00000406501 404 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 RN7SL254P-201ENST00000460609 284 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC104339.1-201ENST00000465478 348 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 RN7SL714P-201ENST00000487050 298 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC023141.11-201ENST00000508864 202 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 ZNF519P4-201ENST00000514008 125 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 SNORA70.19-201ENST00000516717 90 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNA5SP441-201ENST00000516809 88 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC073916.1-201ENST00000545095 130 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC024255.1-201ENST00000614376 102 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC110079.1-202ENST00000635213 138 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 MIR7515-201ENST00000637837 67 ntBASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP9-4Q9BYQ2 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP9-4Q9BYQ2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC1.83□□□□□ -2.12
KRTAP9-4Q9BYQ2 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP9-4Q9BYQ2 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP9-4Q9BYQ2 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
KRTAP9-4Q9BYQ2 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP9-4Q9BYQ2 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms