RNA–Protein interactions for RNA: ENST00000384722.1

RNU6-535P-201, Transcript of RNA, U6 small nuclear 535, pseudogene, humanhuman

BASIC

Gene RNU6-535P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-535P-201ENST00000384722 AEBP2Q6ZN18 517 aaPredicted RBP6.38□□□□□ -1.39
RNU6-535P-201ENST00000384722 CHIC1Q5VXU3 224 aa6.05□□□□□ -1.44
RNU6-535P-201ENST00000384722 SENP3Q9H4L4 574 aaPredicted RBP5.5□□□□□ -1.53
RNU6-535P-201ENST00000384722 PHF23Q9BUL5 403 aaPredicted RBP5.39□□□□□ -1.55
RNU6-535P-201ENST00000384722 FOXD1Q16676 465 aa5.1□□□□□ -1.59
RNU6-535P-201ENST00000384722 PLPPR3Q6T4P5 718 aa4.83□□□□□ -1.64
RNU6-535P-201ENST00000384722 MSH5O43196 834 aa4.82□□□□□ -1.64
RNU6-535P-201ENST00000384722 PIAS4Q8N2W9 510 aaPredicted RBP4.75□□□□□ -1.65
RNU6-535P-201ENST00000384722 POTEDQ86YR6 584 aa4.74□□□□□ -1.65
RNU6-535P-201ENST00000384722 PPP6R1Q9UPN7 881 aa4.71□□□□□ -1.66
RNU6-535P-201ENST00000384722 ADRA2BP18089 450 aa4.69□□□□□ -1.66
RNU6-535P-201ENST00000384722 SCAF1Q9H7N4 1312 aaKnown RBP4.36□□□□□ -1.71
RNU6-535P-201ENST00000384722 DMRT2Q9Y5R5 561 aa4.34□□□□□ -1.71
RNU6-535P-201ENST00000384722 MAPK8IP2Q13387 824 aaPredicted RBP4.31□□□□□ -1.72
RNU6-535P-201ENST00000384722 PPP4R3CPQ6ZMV5 832 aa4.2□□□□□ -1.74
RNU6-535P-201ENST00000384722 HOXD11P31277 338 aaPredicted RBP4.18□□□□□ -1.74
RNU6-535P-201ENST00000384722 CNKSR2Q8WXI2 1034 aa4.16□□□□□ -1.74
RNU6-535P-201ENST00000384722 RNF216Q9NWF9 866 aaPredicted RBP4.14□□□□□ -1.75
RNU6-535P-201ENST00000384722 CACNB1Q02641 598 aaPredicted RBP4.13□□□□□ -1.75
RNU6-535P-201ENST00000384722 DCAF8L1A6NGE4 600 aa4.11□□□□□ -1.75
RNU6-535P-201ENST00000384722 RNF39Q9H2S5 420 aa4.1□□□□□ -1.75
RNU6-535P-201ENST00000384722 DNAJC5BQ9UF47 199 aa4.1□□□□□ -1.75
RNU6-535P-201ENST00000384722 NCBP3Q53F19 620 aaKnown RBP4.06□□□□□ -1.76
RNU6-535P-201ENST00000384722 C1QBPQ07021 282 aaKnown RBP4.05□□□□□ -1.76
RNU6-535P-201ENST00000384722 NPM3O75607 178 aaKnown RBP3.97□□□□□ -1.77
RNU6-535P-201ENST00000384722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.94□□□□□ -1.78
RNU6-535P-201ENST00000384722 U3KPZ7 1027 aaPredicted RBP3.87□□□□□ -1.79
RNU6-535P-201ENST00000384722 KCNA4P22459 653 aa3.84□□□□□ -1.79
RNU6-535P-201ENST00000384722 DSG3P32926 999 aa3.81□□□□□ -1.8
RNU6-535P-201ENST00000384722 APLP2Q06481 763 aa3.81□□□□□ -1.8
RNU6-535P-201ENST00000384722 CAPN15O75808 1086 aa3.8□□□□□ -1.8
RNU6-535P-201ENST00000384722 SLC4A2P04920 1241 aa3.8□□□□□ -1.8
RNU6-535P-201ENST00000384722 SPINK5Q9NQ38 1064 aaPredicted RBP3.8□□□□□ -1.8
RNU6-535P-201ENST00000384722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.79□□□□□ -1.8
RNU6-535P-201ENST00000384722 HNRNPUL2Q1KMD3 747 aaKnown RBP3.79□□□□□ -1.8
RNU6-535P-201ENST00000384722 ZNF219Q9P2Y4 722 aaPredicted RBP3.77□□□□□ -1.81
RNU6-535P-201ENST00000384722 SAMD1Q6SPF0 538 aaPredicted RBP3.75□□□□□ -1.81
RNU6-535P-201ENST00000384722 TRHP20396 242 aaPredicted RBP3.72□□□□□ -1.81
RNU6-535P-201ENST00000384722 POTEHQ6S545 545 aa3.71□□□□□ -1.82
RNU6-535P-201ENST00000384722 ABCB7O75027 752 aa3.69□□□□□ -1.82
RNU6-535P-201ENST00000384722 MYCNP04198 464 aaPredicted RBP3.69□□□□□ -1.82
RNU6-535P-201ENST00000384722 RBM42Q9BTD8 480 aaKnown RBP3.67□□□□□ -1.82
RNU6-535P-201ENST00000384722 POLA2Q14181 598 aa3.63□□□□□ -1.83
RNU6-535P-201ENST00000384722 SLC4A1APQ9BWU0 796 aaKnown RBP3.63□□□□□ -1.83
RNU6-535P-201ENST00000384722 FOXD4L1Q9NU39 408 aa3.62□□□□□ -1.83
RNU6-535P-201ENST00000384722 ZBTB12Q9Y330 459 aaPredicted RBP3.6□□□□□ -1.83
RNU6-535P-201ENST00000384722 CHRDL2Q6WN34 429 aa3.58□□□□□ -1.84
RNU6-535P-201ENST00000384722 AKT1S1Q96B36 256 aa3.57□□□□□ -1.84
RNU6-535P-201ENST00000384722 ATXN8OSP0DMR3 200 aa3.56□□□□□ -1.84
RNU6-535P-201ENST00000384722 ATF5Q9Y2D1 282 aaPredicted RBP3.56□□□□□ -1.84
RNU6-535P-201ENST00000384722 ZBTB22O15209 634 aa3.52□□□□□ -1.85
RNU6-535P-201ENST00000384722 REM2Q8IYK8 340 aaPredicted RBP3.51□□□□□ -1.85
RNU6-535P-201ENST00000384722 OSCARQ8IYS5 282 aa3.5□□□□□ -1.85
RNU6-535P-201ENST00000384722 SPDYE2BA6NHP3 402 aa3.47□□□□□ -1.85
RNU6-535P-201ENST00000384722 PITPNM1O00562 1244 aa3.47□□□□□ -1.85
RNU6-535P-201ENST00000384722 SPDYE6P0CI01 402 aa3.47□□□□□ -1.85
RNU6-535P-201ENST00000384722 FBLN2P98095 1184 aa3.47□□□□□ -1.85
RNU6-535P-201ENST00000384722 SPDYE2Q495Y8 402 aa3.47□□□□□ -1.85
RNU6-535P-201ENST00000384722 PIP4P2Q8N4L2 257 aa3.47□□□□□ -1.85
RNU6-535P-201ENST00000384722 FXR2P51116 673 aaKnown RBP eCLIP3.46□□□□□ -1.86
RNU6-535P-201ENST00000384722 SP7Q8TDD2 431 aaPredicted RBP3.46□□□□□ -1.86
RNU6-535P-201ENST00000384722 SSUH2Q9Y2M2 353 aa3.42□□□□□ -1.86
RNU6-535P-201ENST00000384722 HAX1O00165 279 aa3.41□□□□□ -1.86
RNU6-535P-201ENST00000384722 MKRN4PQ13434 485 aaPredicted RBP3.41□□□□□ -1.86
RNU6-535P-201ENST00000384722 SPDYE1Q8NFV5 336 aaPredicted RBP3.41□□□□□ -1.86
RNU6-535P-201ENST00000384722 ZNF692Q9BU19 519 aaPredicted RBP3.4□□□□□ -1.87
RNU6-535P-201ENST00000384722 PRKAR2AP13861 404 aaKnown RBP3.37□□□□□ -1.87
RNU6-535P-201ENST00000384722 CLEC11AQ9Y240 323 aa3.37□□□□□ -1.87
RNU6-535P-201ENST00000384722 C19orf67A6NJJ6 358 aa3.35□□□□□ -1.87
RNU6-535P-201ENST00000384722 EVX2Q03828 476 aa3.35□□□□□ -1.87
RNU6-535P-201ENST00000384722 PABPN1Q86U42 306 aaKnown RBP eCLIP3.34□□□□□ -1.87
RNU6-535P-201ENST00000384722 PRR29P0C7W0 189 aa3.33□□□□□ -1.88
RNU6-535P-201ENST00000384722 CSRNP3Q8WYN3 585 aa3.33□□□□□ -1.88
RNU6-535P-201ENST00000384722 CLCN6P51797 869 aa3.31□□□□□ -1.88
RNU6-535P-201ENST00000384722 GABBR2O75899 941 aa3.3□□□□□ -1.88
RNU6-535P-201ENST00000384722 CHADLQ6NUI6 762 aa3.3□□□□□ -1.88
RNU6-535P-201ENST00000384722 STAG3Q9UJ98 1225 aa3.28□□□□□ -1.88
RNU6-535P-201ENST00000384722 FARP1Q9Y4F1 1045 aaPredicted RBP3.28□□□□□ -1.88
RNU6-535P-201ENST00000384722 CD44P16070 742 aaKnown RBP3.27□□□□□ -1.89
RNU6-535P-201ENST00000384722 SPDYE4A6NLX3 237 aa3.24□□□□□ -1.89
RNU6-535P-201ENST00000384722 LHX8Q68G74 356 aa3.24□□□□□ -1.89
RNU6-535P-201ENST00000384722 ZNF579Q8NAF0 562 aaKnown RBP3.24□□□□□ -1.89
RNU6-535P-201ENST00000384722 CREBZFQ9NS37 354 aa3.23□□□□□ -1.89
RNU6-535P-201ENST00000384722 POTEIP0CG38 1075 aa3.22□□□□□ -1.89
RNU6-535P-201ENST00000384722 EHMT2Q96KQ7 1210 aa3.22□□□□□ -1.89
RNU6-535P-201ENST00000384722 PAK3O75914 559 aaPredicted RBP3.2□□□□□ -1.9
RNU6-535P-201ENST00000384722 NPM1P06748 294 aaKnown RBP eCLIP3.2□□□□□ -1.9
RNU6-535P-201ENST00000384722 DCBLD2Q96PD2 775 aa3.2□□□□□ -1.9
RNU6-535P-201ENST00000384722 ZRANB1Q9UGI0 708 aa3.2□□□□□ -1.9
RNU6-535P-201ENST00000384722 MNX1P50219 401 aaPredicted RBP3.19□□□□□ -1.9
RNU6-535P-201ENST00000384722 PROM2Q8N271 834 aa3.19□□□□□ -1.9
RNU6-535P-201ENST00000384722 GALR2O43603 387 aaPredicted RBP3.16□□□□□ -1.9
RNU6-535P-201ENST00000384722 ASTLQ6HA08 431 aaPredicted RBP3.14□□□□□ -1.91
RNU6-535P-201ENST00000384722 PHF12Q96QT6 1004 aa3.14□□□□□ -1.91
RNU6-535P-201ENST00000384722 PLEKHG5O94827 1062 aa3.12□□□□□ -1.91
RNU6-535P-201ENST00000384722 C7P10643 843 aa3.12□□□□□ -1.91
RNU6-535P-201ENST00000384722 CCDC61Q9Y6R9 512 aa3.12□□□□□ -1.91
RNU6-535P-201ENST00000384722 ATMINO43313 823 aaPredicted RBP3.11□□□□□ -1.91
RNU6-535P-201ENST00000384722 PELP1Q8IZL8 1130 aaKnown RBP3.11□□□□□ -1.91
RNU6-535P-201ENST00000384722 SLC39A7Q92504 469 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms