Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MIR548AA1-201ENST00000384971 97 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR188-201ENST00000385034 86 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 U3.43-201ENST00000410734 213 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 AL139247.1-201ENST00000422768 325 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 AL445193.1-201ENST00000441183 141 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 AC093850.1-201ENST00000454121 251 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 AC109327.1-201ENST00000471666 403 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 RN7SL174P-201ENST00000475578 289 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 RN7SL561P-201ENST00000488553 281 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 TRAJ51-201ENST00000504127 63 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 AL390198.2-201ENST00000510553 222 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORA9.3-201ENST00000516383 129 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU6-176P-201ENST00000517196 105 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU4ATAC-201ENST00000580972 127 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR4271-201ENST00000582451 67 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 AC090115.4-201ENST00000609970 188 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 U1.41-201ENST00000617626 165 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR6085-201ENST00000618314 110 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 AP005431.1-201ENST00000618479 319 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 U2.18-201ENST00000622185 84 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 MTRNR2L9-201ENST00000622562 75 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 AC091905.4-201ENST00000623432 202 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 AC027279.3-201ENST00000625055 122 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 IPO8P1-201ENST00000455509 3109 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 SALL4P2-201ENST00000423288 2910 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 MAPK10-362ENST00000641864 4484 ntBASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
KRTAP4-4Q9BYR3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 AC239868.2-201ENST00000564237 4527 ntBASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 LINC01963-201ENST00000562038 3148 ntBASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 RNA5SP326-201ENST00000363209 110 ntBASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORA51.1-201ENST00000363243 140 ntBASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU1-124P-201ENST00000363861 145 ntBASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU6-598P-201ENST00000364017 105 ntBASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORA33.1-201ENST00000364957 130 ntBASIC1.14□□□□□ -2.23
KRTAP4-4Q9BYR3 Y_RNA.335-201ENST00000365299 96 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms