Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SNORD116-17-201ENST00000383929 92 ntBASIC3.91□□□□□ -1.78
TRIM50Q86XT4 RNY3P5-201ENST00000384127 102 ntBASIC3.91□□□□□ -1.78
TRIM50Q86XT4 SNORD116-15-201ENST00000384445 92 ntBASIC3.91□□□□□ -1.78
TRIM50Q86XT4 SNORD20-201ENST00000384550 80 ntBASIC3.91□□□□□ -1.78
TRIM50Q86XT4 SNORD116-19-201ENST00000384729 92 ntBASIC3.91□□□□□ -1.78
TRIM50Q86XT4 RPL30P4-201ENST00000429309 333 ntBASIC3.91□□□□□ -1.78
TRIM50Q86XT4 AL353705.1-201ENST00000433468 480 ntBASIC3.91□□□□□ -1.78
TRIM50Q86XT4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM50Q86XT4 RN7SL330P-201ENST00000469709 307 ntBASIC3.91□□□□□ -1.78
TRIM50Q86XT4 AC092991.1-201ENST00000477176 376 ntBASIC3.91□□□□□ -1.78
TRIM50Q86XT4 RNU6-948P-201ENST00000516374 107 ntBASIC3.91□□□□□ -1.78
TRIM50Q86XT4 SNORD59.2-201ENST00000516873 68 ntBASIC3.91□□□□□ -1.78
TRIM50Q86XT4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM50Q86XT4 TUG1_4.1-201ENST00000619464 181 ntBASIC3.91□□□□□ -1.78
TRIM50Q86XT4 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.91□□□□□ -1.78
TRIM50Q86XT4 AP003355.3-201ENST00000623465 114 ntBASIC3.91□□□□□ -1.78
TRIM50Q86XT4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM50Q86XT4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM50Q86XT4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM50Q86XT4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
TRIM50Q86XT4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM50Q86XT4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.9□□□□□ -1.78
TRIM50Q86XT4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM50Q86XT4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM50Q86XT4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM50Q86XT4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM50Q86XT4 RNU4-13P-201ENST00000364019 141 ntBASIC3.9□□□□□ -1.79
TRIM50Q86XT4 RNU6-1180P-201ENST00000364935 107 ntBASIC3.9□□□□□ -1.79
TRIM50Q86XT4 Y_RNA.393-201ENST00000383936 102 ntBASIC3.9□□□□□ -1.79
TRIM50Q86XT4 Y_RNA.587-201ENST00000391210 103 ntBASIC3.9□□□□□ -1.79
TRIM50Q86XT4 RNU6-588P-201ENST00000410281 105 ntBASIC3.9□□□□□ -1.79
TRIM50Q86XT4 AC115115.1-201ENST00000449927 248 ntBASIC3.9□□□□□ -1.79
TRIM50Q86XT4 RPL36AP21-201ENST00000490372 323 ntBASIC3.9□□□□□ -1.79
TRIM50Q86XT4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM50Q86XT4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.9□□□□□ -1.79
TRIM50Q86XT4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.9□□□□□ -1.79
TRIM50Q86XT4 AC025647.1-201ENST00000517879 253 ntBASIC3.9□□□□□ -1.79
TRIM50Q86XT4 MIR3646-201ENST00000578301 84 ntBASIC3.9□□□□□ -1.79
TRIM50Q86XT4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM50Q86XT4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM50Q86XT4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM50Q86XT4 SNORD45.3-201ENST00000363836 72 ntBASIC3.89□□□□□ -1.79
TRIM50Q86XT4 RNU4-41P-201ENST00000364426 143 ntBASIC3.89□□□□□ -1.79
TRIM50Q86XT4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TRIM50Q86XT4 RNA5SP511-201ENST00000410487 115 ntBASIC3.89□□□□□ -1.79
TRIM50Q86XT4 RNA5SP120-201ENST00000410900 112 ntBASIC3.89□□□□□ -1.79
TRIM50Q86XT4 CYCSP49-201ENST00000420810 319 ntBASIC3.89□□□□□ -1.79
TRIM50Q86XT4 RPL23AP58-201ENST00000440453 469 ntBASIC3.89□□□□□ -1.79
TRIM50Q86XT4 RPS12P18-201ENST00000442381 270 ntBASIC3.89□□□□□ -1.79
TRIM50Q86XT4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM50Q86XT4 AC016925.1-201ENST00000458303 298 ntBASIC3.89□□□□□ -1.79
TRIM50Q86XT4 AC090515.1-201ENST00000465295 476 ntBASIC3.89□□□□□ -1.79
TRIM50Q86XT4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM50Q86XT4 IGKV2-26-201ENST00000518305 343 ntBASIC3.89□□□□□ -1.79
TRIM50Q86XT4 MIR5047-201ENST00000579212 100 ntBASIC3.89□□□□□ -1.79
TRIM50Q86XT4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM50Q86XT4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM50Q86XT4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM50Q86XT4 RNA5SP42-201ENST00000364278 115 ntBASIC3.88□□□□□ -1.79
TRIM50Q86XT4 RNU6-136P-201ENST00000384663 107 ntBASIC3.88□□□□□ -1.79
TRIM50Q86XT4 RNU1-101P-201ENST00000391171 127 ntBASIC3.88□□□□□ -1.79
TRIM50Q86XT4 RNU4-43P-201ENST00000410628 137 ntBASIC3.88□□□□□ -1.79
TRIM50Q86XT4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.88□□□□□ -1.79
TRIM50Q86XT4 RPS27P22-201ENST00000478056 241 ntBASIC3.88□□□□□ -1.79
TRIM50Q86XT4 RNU2-56P-201ENST00000516826 190 ntBASIC3.88□□□□□ -1.79
TRIM50Q86XT4 RNU6-579P-201ENST00000516879 102 ntBASIC3.88□□□□□ -1.79
TRIM50Q86XT4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
TRIM50Q86XT4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
TRIM50Q86XT4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM50Q86XT4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM50Q86XT4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
TRIM50Q86XT4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM50Q86XT4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM50Q86XT4 RNU6-525P-201ENST00000363685 104 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 Y_RNA.273-201ENST00000364703 102 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 Y_RNA.353-201ENST00000365440 108 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 CD24P4-201ENST00000382840 243 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 RNU6-1235P-201ENST00000384559 107 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 SNORA79-201ENST00000408376 140 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 MIR1278-201ENST00000408753 81 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TRIM50Q86XT4 AC008134.1-201ENST00000420943 193 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 SNRPGP8-201ENST00000454064 226 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 RNU6-498P-201ENST00000459468 107 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 RN7SKP57-201ENST00000517248 293 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 AP001328.1-201ENST00000528550 176 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM50Q86XT4 MIR3199-1-201ENST00000582434 88 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 MIR7112-201ENST00000616126 65 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 MIR1248-201ENST00000629190 106 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 MIR7515-201ENST00000637837 67 ntBASIC3.87□□□□□ -1.79
TRIM50Q86XT4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM50Q86XT4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM50Q86XT4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
TRIM50Q86XT4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
TRIM50Q86XT4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM50Q86XT4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM50Q86XT4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM50Q86XT4 RNY1P11-201ENST00000363759 113 ntBASIC3.86□□□□□ -1.79
TRIM50Q86XT4 AL512604.1-201ENST00000404812 257 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 223.2 ms