Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 CCR12P-201ENST00000446203 998 ntBASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 AC145285.6-201ENST00000604632 637 ntBASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHGC4Q9Y5F7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 KRT8P3-201ENST00000519669 1449 ntBASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 AC092338.2-201ENST00000568827 1415 ntBASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 AC007663.1-201ENST00000438948 1240 ntBASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 TSPY17P-201ENST00000450329 467 ntBASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 AL353719.1-201ENST00000566847 864 ntBASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 AC012306.2-201ENST00000609350 630 ntBASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHGC4Q9Y5F7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGC4Q9Y5F7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PCDHGC4Q9Y5F7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHGC4Q9Y5F7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PCDHGC4Q9Y5F7 KRT18P22-201ENST00000402024 1347 ntBASIC19.08■□□□□ 0.65
PCDHGC4Q9Y5F7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGC4Q9Y5F7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGC4Q9Y5F7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 AP003041.3-201ENST00000527151 707 ntBASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 AC097493.4-201ENST00000641197 219 ntBASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGC4Q9Y5F7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 AP000974.1-201ENST00000623909 2387 ntBASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 AC087289.5-201ENST00000586076 3175 ntBASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 AC128688.1-201ENST00000487626 519 ntBASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 LINC01023-201ENST00000606054 436 ntBASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGC4Q9Y5F7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC4Q9Y5F7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGC4Q9Y5F7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC4Q9Y5F7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGC4Q9Y5F7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC4Q9Y5F7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGC4Q9Y5F7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGC4Q9Y5F7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PCDHGC4Q9Y5F7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms